| Parameters | Input.values |
|---|---|
| Folder name : | Example data |
| Sequence name : | CDH1 |
| Group : | Low methylated DNA |
| Experiment type : | Direct-BSP |
| Replicate number : | 2 |
| Date of sequencing #1 : | 2022-05-02 |
| Date of sequencing #2 : | 2022-05-02 |
| Date of analysis : | 2022-05-18 12:52 |
| Prefix of output files : | CDH1_Low methylated DNA_2 |
| Reference DNA sequence information | Input values |
|---|---|
| Name | CDH1 |
| Strand used for primer design | Plus strand |
| Length | 341 pb |
| Coordinates on reference genome | chr16:68770940-68771280 |
## CCACCGGCGGGGCTGGGATTCGAACCCAGTGGAATCAGAACCGTGCAGGTCCCATAACCCACCTAGACCCTAGCAACTCCAGGCTAGAGGGTCACCGCGTCTATGCGAGGCCGGGTGGGCGGGCCGTCAGCTCCGCCCTGGGGAGGGGTCCGCGCTGCTGATTGGCTGTGGCCGGCAGGTGAACCCTCAGCCAATCAGCGGTACGGGGGGCGGTGCCTCCGGGGCTCACCTGGCTGCAGCCACGCACCCCCTCTCAGTGGCGTCGGAACTGCAAAGCACCTGTGAGCTTGCGGAAGTCAGTTCAGACTCCAGCCCGCTCCAGCCCGGCCCGACCCGACCGC
## GCGGTCGGGTCGGGCCGGGCTGGAGCGGGCTGGAGTCTGAACTGACTTCCGCAAGCTCACAGGTGCTTTGCAGTTCCGACGCCACTGAGAGGGGGTGCGTGGCTGCAGCCAGGTGAGCCCCGGAGGCACCGCCCCCCGTACCGCTGATTGGCTGAGGGTTCACCTGCCGGCCACAGCCAATCAGCAGCGCGGACCCCTCCCCAGGGCGGAGCTGACGGCCCGCCCACCCGGCCTCGCATAGACGCGGTGACCCTCTAGCCTGGAGTTGCTAGGGTCTAGGTGGGTTATGGGACCTGCACGGTTCTGATTCCACTGGGTTCGAATCCCAGCCCCGCCGGTGG
| CG number | chr | start | end | C position | G position |
|---|---|---|---|---|---|
| 1 | chr16 | 68770944 | 68770945 | 5 | 6 |
| 2 | chr16 | 68770947 | 68770948 | 8 | 9 |
| 3 | chr16 | 68770960 | 68770961 | 21 | 22 |
| 4 | chr16 | 68770981 | 68770982 | 42 | 43 |
| 5 | chr16 | 68771035 | 68771036 | 96 | 97 |
| 6 | chr16 | 68771037 | 68771038 | 98 | 99 |
| 7 | chr16 | 68771045 | 68771046 | 106 | 107 |
| 8 | chr16 | 68771051 | 68771052 | 112 | 113 |
| 9 | chr16 | 68771059 | 68771060 | 120 | 121 |
| 10 | chr16 | 68771064 | 68771065 | 125 | 126 |
| 11 | chr16 | 68771073 | 68771074 | 134 | 135 |
| 12 | chr16 | 68771090 | 68771091 | 151 | 152 |
| 13 | chr16 | 68771092 | 68771093 | 153 | 154 |
| 14 | chr16 | 68771112 | 68771113 | 173 | 174 |
| 15 | chr16 | 68771138 | 68771139 | 199 | 200 |
| 16 | chr16 | 68771143 | 68771144 | 204 | 205 |
| 17 | chr16 | 68771150 | 68771151 | 211 | 212 |
| 18 | chr16 | 68771159 | 68771160 | 220 | 221 |
| 19 | chr16 | 68771182 | 68771183 | 243 | 244 |
| 20 | chr16 | 68771200 | 68771201 | 261 | 262 |
| 21 | chr16 | 68771203 | 68771204 | 264 | 265 |
| 22 | chr16 | 68771230 | 68771231 | 291 | 292 |
| 23 | chr16 | 68771254 | 68771255 | 315 | 316 |
| 24 | chr16 | 68771264 | 68771265 | 325 | 326 |
| 25 | chr16 | 68771269 | 68771270 | 330 | 331 |
| 26 | chr16 | 68771274 | 68771275 | 335 | 336 |
| 27 | chr16 | 68771278 | 68771279 | 339 | 340 |
| CG number | chr | start | end | C position | G position |
|---|---|---|---|---|---|
| 27 | chr16 | 68771278 | 68771279 | 2 | 3 |
| 26 | chr16 | 68771274 | 68771275 | 6 | 7 |
| 25 | chr16 | 68771269 | 68771270 | 11 | 12 |
| 24 | chr16 | 68771264 | 68771265 | 16 | 17 |
| 23 | chr16 | 68771254 | 68771255 | 26 | 27 |
| 22 | chr16 | 68771230 | 68771231 | 50 | 51 |
| 21 | chr16 | 68771203 | 68771204 | 77 | 78 |
| 20 | chr16 | 68771200 | 68771201 | 80 | 81 |
| 19 | chr16 | 68771182 | 68771183 | 98 | 99 |
| 18 | chr16 | 68771159 | 68771160 | 121 | 122 |
| 17 | chr16 | 68771150 | 68771151 | 130 | 131 |
| 16 | chr16 | 68771143 | 68771144 | 137 | 138 |
| 15 | chr16 | 68771138 | 68771139 | 142 | 143 |
| 14 | chr16 | 68771112 | 68771113 | 168 | 169 |
| 13 | chr16 | 68771092 | 68771093 | 188 | 189 |
| 12 | chr16 | 68771090 | 68771091 | 190 | 191 |
| 11 | chr16 | 68771073 | 68771074 | 207 | 208 |
| 10 | chr16 | 68771064 | 68771065 | 216 | 217 |
| 9 | chr16 | 68771059 | 68771060 | 221 | 222 |
| 8 | chr16 | 68771051 | 68771052 | 229 | 230 |
| 7 | chr16 | 68771045 | 68771046 | 235 | 236 |
| 6 | chr16 | 68771037 | 68771038 | 243 | 244 |
| 5 | chr16 | 68771035 | 68771036 | 245 | 246 |
| 4 | chr16 | 68770981 | 68770982 | 299 | 300 |
| 3 | chr16 | 68770960 | 68770961 | 320 | 321 |
| 2 | chr16 | 68770947 | 68770948 | 333 | 334 |
| 1 | chr16 | 68770944 | 68770945 | 336 | 337 |
Bisulfite converted sequence of the plus strand as indicated as the template strand.
## TTATCGGCGGGGTTGGGATTCGAATTTAGTGGAATTAGAATCGTGTAGGTTTTATAATTTATTTAGATTTTAGTAATTTTAGGTTAGAGGGTTATCGCGTTTATGCGAGGTCGGGTGGGCGGGTCGTTAGTTTCGTTTTGGGGAGGGGTTCGCGTTGTTGATTGGTTGTGGTCGGTAGGTGAATTTTTAGTTAATTAGCGGTACGGGGGGCGGTGTTTTCGGGGTTTATTTGGTTGTAGTTACGTATTTTTTTTTAGTGGCGTCGGAATTGTAAAGTATTTGTGAGTTTGCGGAAGTTAGTTTAGATTTTAGTTCGTTTTAGTTCGGTTCGATTCGATCGT
Reverse complement of the bisulfite converted sequence from the plus strand.
## ACGATCGAATCGAACCGAACTAAAACGAACTAAAATCTAAACTAACTTCCGCAAACTCACAAATACTTTACAATTCCGACGCCACTAAAAAAAAATACGTAACTACAACCAAATAAACCCCGAAAACACCGCCCCCCGTACCGCTAATTAACTAAAAATTCACCTACCGACCACAACCAATCAACAACGCGAACCCCTCCCCAAAACGAAACTAACGACCCGCCCACCCGACCTCGCATAAACGCGATAACCCTCTAACCTAAAATTACTAAAATCTAAATAAATTATAAAACCTACACGATTCTAATTCCACTAAATTCGAATCCCAACCCCGCCGATAA
| Thresholds | Values |
|---|---|
| Minimum length of the trimmed sequence : | 30 bp |
| Minimum Phred quality score : | 30 |
| Minimum ratio of primary peak : | 0.75 |
| Minimum percentage of non-mixed positions : | 75 % |
| Sequencing | Length | Start position | End position | Mean of Phred quality scores | Mean of primary peak ratio | Percentage of non-mixed positions | Trimmed sequence quality |
|---|---|---|---|---|---|---|---|
| #1 | 47 | 24 | 70 | 27.96 | 0.86 | 78.72 | Incorrect |
| #2 | 200 | 8 | 207 | 40.44 | 0.89 | 82.00 | Correct |
Sequence of primary peaks:
Length: 1067 bp
## ATATTTAGAGAGTTCTAGTAGATGACTATTGTGATTGTGAGTATTTGTGAGTTTCCTCGACTGTGCCTTCTAAGAGGAGGGGTTCGCGTTGTTGATTGGTTGTGGTCGGNAGGGGAATTTTTAGTTAATTAGCGGCACGGGGGGCGGNGTTTTCGGGGGTNATTTGGNTGCAGTTACGTTTTTTTTTTTTTAGGCGTCGGAANAGTAAAGTATCCGNGAGTTNCCTCGAGTGTGNATTCGAACACTTAAGTGAAGGGATGTATTTANTATACTACACNCCNCTATCCCTTCGTNGACTTGCAGGTGACTCTTGATNACNATTCNCACCNCAAGCCTTCAGCCGCCNCCGCTTCATTCAGATTTCGGCCCAATCAACTTTCAATGGGACGTGAAAGAACTACCCTGATTCCACCGANAGCGGNCACCTATAGCTTGANTCCNNAGNGGCTACCNGATAGATGNCTANNACTTTCNGAGNAATGCAANATNCGCCCAAANTACCCAATCCCGACACNCACANGTAGTGNGACATCCCCCAATGCTTNTCGATGTCCTATGAGCAGTTCAAATGAGAATAANCTANATCCCTNANANNGNAANCTTANCACGCAGGTCGCGTNCNCCATCCGCGGTATTTCCNGCTCTAATACCGCAAGTCAGAGTATGTGCCGTCAGAAACTCCTAGTNGGGTCNNGACGGCGCCCTGTGNTTGGGTCCGNCGANTCAAAAGNGCTCGTCGCGNAACTCTNCGCACTAGATCTTCGANACTNCNCTTAANCTGGTGGANCGANGGCCTTAAGACCGCCCGCTGCGNGTTAACCCTGCAGATTTNAGTCTGNACAACTACTTTTANCNTCGCCGATCCCGCNGTGCCGATCNNGCCNAGTAGCGNACNNGACTCCNACTCNGTTAGGTTGANNGAATCAANCNNCAAAANCNCCCTCTAGGGNGNGAATANNAANNAAGANNNGNGGNCNNGGAAAAGGGGACCTGGCCCCNCANTNTGNNGATTTNCNGANNTNAAAAAAATAATNATAACNCCCCAAGGTTAAAANAACCTCACCCCC
Open chromatogram file in a new tab
| Position | A peak | T peak | G peak | C peak | Total | A ratio | T ratio | G ratio | C ratio | Primary base | Quality score | Primary ratio |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 11 | 0 | 5 | 0 | 16 | 0.69 | 0.00 | 0.31 | 0.00 | A | 2 | 0.69 |
| 2 | 8 | 14 | 1 | 0 | 23 | 0.35 | 0.61 | 0.04 | 0.00 | T | 5 | 0.61 |
| 3 | 20 | 0 | 0 | 2 | 22 | 0.91 | 0.00 | 0.00 | 0.09 | A | 5 | 0.91 |
| 4 | 0 | 17 | 0 | 2 | 19 | 0.00 | 0.89 | 0.00 | 0.11 | T | 4 | 0.89 |
| 5 | 0 | 19 | 0 | 2 | 21 | 0.00 | 0.90 | 0.00 | 0.10 | T | 4 | 0.90 |
| 6 | 0 | 16 | 0 | 2 | 18 | 0.00 | 0.89 | 0.00 | 0.11 | T | 4 | 0.89 |
| 7 | 17 | 0 | 0 | 0 | 17 | 1.00 | 0.00 | 0.00 | 0.00 | A | 4 | 1.00 |
| 8 | 0 | 0 | 125 | 1 | 126 | 0.00 | 0.00 | 0.99 | 0.01 | G | 11 | 0.99 |
| 9 | 4 | 0 | 0 | 0 | 4 | 1.00 | 0.00 | 0.00 | 0.00 | A | 4 | 1.00 |
| 10 | 7 | 0 | 96 | 0 | 103 | 0.07 | 0.00 | 0.93 | 0.00 | G | 25 | 0.93 |
| 11 | 25 | 19 | 0 | 0 | 44 | 0.57 | 0.43 | 0.00 | 0.00 | A | 4 | 0.57 |
| 12 | 0 | 0 | 639 | 26 | 665 | 0.00 | 0.00 | 0.96 | 0.04 | G | 4 | 0.96 |
| 13 | 0 | 1880 | 0 | 26 | 1906 | 0.00 | 0.99 | 0.00 | 0.01 | T | 9 | 0.99 |
| 14 | 0 | 1946 | 0 | 20 | 1966 | 0.00 | 0.99 | 0.00 | 0.01 | T | 7 | 0.99 |
| 15 | 0 | 0 | 37 | 572 | 609 | 0.00 | 0.00 | 0.06 | 0.94 | C | 4 | 0.94 |
| 16 | 0 | 1693 | 0 | 0 | 1693 | 0.00 | 1.00 | 0.00 | 0.00 | T | 9 | 1.00 |
| 17 | 1348 | 0 | 0 | 0 | 1348 | 1.00 | 0.00 | 0.00 | 0.00 | A | 4 | 1.00 |
| 18 | 0 | 0 | 2063 | 32 | 2095 | 0.00 | 0.00 | 0.98 | 0.02 | G | 12 | 0.98 |
| 19 | 0 | 1192 | 0 | 0 | 1192 | 0.00 | 1.00 | 0.00 | 0.00 | T | 7 | 1.00 |
| 20 | 1034 | 0 | 0 | 30 | 1064 | 0.97 | 0.00 | 0.00 | 0.03 | A | 9 | 0.97 |
| 21 | 0 | 0 | 650 | 30 | 680 | 0.00 | 0.00 | 0.96 | 0.04 | G | 7 | 0.96 |
| 22 | 1321 | 12 | 0 | 0 | 1333 | 0.99 | 0.01 | 0.00 | 0.00 | A | 16 | 0.99 |
| 23 | 0 | 12 | 0 | 11 | 23 | 0.00 | 0.52 | 0.00 | 0.48 | T | 17 | 0.52 |
| 24 | 0 | 0 | 1749 | 13 | 1762 | 0.00 | 0.00 | 0.99 | 0.01 | G | 41 | 0.99 |
| 25 | 72 | 0 | 0 | 6 | 78 | 0.92 | 0.00 | 0.00 | 0.08 | A | 6 | 0.92 |
| 26 | 0 | 0 | 0 | 6 | 6 | 0.00 | 0.00 | 0.00 | 1.00 | C | 9 | 1.00 |
| 27 | 0 | 633 | 0 | 0 | 633 | 0.00 | 1.00 | 0.00 | 0.00 | T | 14 | 1.00 |
| 28 | 719 | 0 | 12 | 26 | 757 | 0.95 | 0.00 | 0.02 | 0.03 | A | 19 | 0.95 |
| 29 | 0 | 605 | 12 | 0 | 617 | 0.00 | 0.98 | 0.02 | 0.00 | T | 11 | 0.98 |
| 30 | 33 | 659 | 0 | 49 | 741 | 0.04 | 0.89 | 0.00 | 0.07 | T | 50 | 0.89 |
| 31 | 0 | 0 | 1375 | 24 | 1399 | 0.00 | 0.00 | 0.98 | 0.02 | G | 58 | 0.98 |
| 32 | 57 | 101 | 0 | 24 | 182 | 0.31 | 0.55 | 0.00 | 0.13 | T | 8 | 0.55 |
| 33 | 0 | 0 | 400 | 0 | 400 | 0.00 | 0.00 | 1.00 | 0.00 | G | 20 | 1.00 |
| 34 | 465 | 0 | 0 | 8 | 473 | 0.98 | 0.00 | 0.00 | 0.02 | A | 23 | 0.98 |
| 35 | 0 | 352 | 2 | 8 | 362 | 0.00 | 0.97 | 0.01 | 0.02 | T | 22 | 0.97 |
| 36 | 0 | 400 | 0 | 14 | 414 | 0.00 | 0.97 | 0.00 | 0.03 | T | 22 | 0.97 |
| 37 | 123 | 0 | 547 | 13 | 683 | 0.18 | 0.00 | 0.80 | 0.02 | G | 25 | 0.80 |
| 38 | 0 | 234 | 0 | 13 | 247 | 0.00 | 0.95 | 0.00 | 0.05 | T | 11 | 0.95 |
| 39 | 182 | 0 | 209 | 7 | 398 | 0.46 | 0.00 | 0.53 | 0.02 | G | 11 | 0.53 |
| 40 | 183 | 50 | 0 | 20 | 253 | 0.72 | 0.20 | 0.00 | 0.08 | A | 8 | 0.72 |
| 41 | 0 | 0 | 373 | 0 | 373 | 0.00 | 0.00 | 1.00 | 0.00 | G | 17 | 1.00 |
| 42 | 85 | 121 | 0 | 0 | 206 | 0.41 | 0.59 | 0.00 | 0.00 | T | 7 | 0.59 |
| 43 | 221 | 0 | 66 | 1 | 288 | 0.77 | 0.00 | 0.23 | 0.00 | A | 9 | 0.77 |
| 44 | 0 | 186 | 134 | 1 | 321 | 0.00 | 0.58 | 0.42 | 0.00 | T | 8 | 0.58 |
| 45 | 6 | 221 | 1 | 0 | 228 | 0.03 | 0.97 | 0.00 | 0.00 | T | 14 | 0.97 |
| 46 | 9 | 219 | 0 | 26 | 254 | 0.04 | 0.86 | 0.00 | 0.10 | T | 14 | 0.86 |
| 47 | 0 | 1 | 436 | 8 | 445 | 0.00 | 0.00 | 0.98 | 0.02 | G | 49 | 0.98 |
| 48 | 5 | 106 | 0 | 6 | 117 | 0.04 | 0.91 | 0.00 | 0.05 | T | 20 | 0.91 |
| 49 | 0 | 0 | 324 | 2 | 326 | 0.00 | 0.00 | 0.99 | 0.01 | G | 62 | 0.99 |
| 50 | 181 | 27 | 0 | 9 | 217 | 0.83 | 0.12 | 0.00 | 0.04 | A | 24 | 0.83 |
| 51 | 0 | 0 | 224 | 0 | 224 | 0.00 | 0.00 | 1.00 | 0.00 | G | 47 | 1.00 |
| 52 | 0 | 100 | 0 | 14 | 114 | 0.00 | 0.88 | 0.00 | 0.12 | T | 17 | 0.88 |
| 53 | 3 | 112 | 24 | 11 | 150 | 0.02 | 0.75 | 0.16 | 0.07 | T | 24 | 0.75 |
| 54 | 4 | 103 | 0 | 20 | 127 | 0.03 | 0.81 | 0.00 | 0.16 | T | 23 | 0.81 |
| 55 | 4 | 1 | 58 | 161 | 224 | 0.02 | 0.00 | 0.26 | 0.72 | C | 31 | 0.72 |
| 56 | 0 | 6 | 29 | 129 | 164 | 0.00 | 0.04 | 0.18 | 0.79 | C | 30 | 0.79 |
| 57 | 2 | 103 | 23 | 0 | 128 | 0.02 | 0.80 | 0.18 | 0.00 | T | 24 | 0.80 |
| 58 | 1 | 16 | 0 | 184 | 201 | 0.00 | 0.08 | 0.00 | 0.92 | C | 43 | 0.92 |
| 59 | 3 | 12 | 95 | 24 | 134 | 0.02 | 0.09 | 0.71 | 0.18 | G | 24 | 0.71 |
| 60 | 112 | 0 | 38 | 7 | 157 | 0.71 | 0.00 | 0.24 | 0.04 | A | 18 | 0.71 |
| 61 | 0 | 12 | 0 | 111 | 123 | 0.00 | 0.10 | 0.00 | 0.90 | C | 36 | 0.90 |
| 62 | 0 | 132 | 2 | 16 | 150 | 0.00 | 0.88 | 0.01 | 0.11 | T | 43 | 0.88 |
| 63 | 17 | 2 | 392 | 10 | 421 | 0.04 | 0.00 | 0.93 | 0.02 | G | 62 | 0.93 |
| 64 | 3 | 74 | 21 | 6 | 104 | 0.03 | 0.71 | 0.20 | 0.06 | T | 27 | 0.71 |
| 65 | 1 | 0 | 222 | 7 | 230 | 0.00 | 0.00 | 0.97 | 0.03 | G | 54 | 0.97 |
| 66 | 3 | 17 | 1 | 116 | 137 | 0.02 | 0.12 | 0.01 | 0.85 | C | 48 | 0.85 |
| 67 | 8 | 19 | 5 | 159 | 191 | 0.04 | 0.10 | 0.03 | 0.83 | C | 56 | 0.83 |
| 68 | 8 | 119 | 0 | 0 | 127 | 0.06 | 0.94 | 0.00 | 0.00 | T | 35 | 0.94 |
| 69 | 20 | 117 | 21 | 9 | 167 | 0.12 | 0.70 | 0.13 | 0.05 | T | 39 | 0.70 |
| 70 | 0 | 15 | 0 | 166 | 181 | 0.00 | 0.08 | 0.00 | 0.92 | C | 51 | 0.92 |
| 71 | 38 | 109 | 1 | 0 | 148 | 0.26 | 0.74 | 0.01 | 0.00 | T | 16 | 0.74 |
| 72 | 300 | 7 | 8 | 9 | 324 | 0.93 | 0.02 | 0.02 | 0.03 | A | 62 | 0.93 |
| 73 | 245 | 16 | 6 | 10 | 277 | 0.88 | 0.06 | 0.02 | 0.04 | A | 59 | 0.88 |
| 74 | 0 | 0 | 41 | 7 | 48 | 0.00 | 0.00 | 0.85 | 0.15 | G | 16 | 0.85 |
| 75 | 54 | 5 | 20 | 8 | 87 | 0.62 | 0.06 | 0.23 | 0.09 | A | 22 | 0.62 |
| 76 | 4 | 5 | 20 | 19 | 48 | 0.08 | 0.10 | 0.42 | 0.40 | G | 16 | 0.42 |
| 77 | 0 | 11 | 21 | 7 | 39 | 0.00 | 0.28 | 0.54 | 0.18 | G | 17 | 0.54 |
| 78 | 26 | 7 | 0 | 6 | 39 | 0.67 | 0.18 | 0.00 | 0.15 | A | 22 | 0.67 |
| 79 | 0 | 9 | 25 | 0 | 34 | 0.00 | 0.26 | 0.74 | 0.00 | G | 27 | 0.74 |
| 80 | 4 | 7 | 36 | 0 | 47 | 0.09 | 0.15 | 0.77 | 0.00 | G | 41 | 0.77 |
| 81 | 0 | 6 | 23 | 9 | 38 | 0.00 | 0.16 | 0.61 | 0.24 | G | 15 | 0.61 |
| 82 | 3 | 0 | 27 | 0 | 30 | 0.10 | 0.00 | 0.90 | 0.00 | G | 15 | 0.90 |
| 83 | 0 | 17 | 0 | 0 | 17 | 0.00 | 1.00 | 0.00 | 0.00 | T | 8 | 1.00 |
| 84 | 9 | 18 | 2 | 0 | 29 | 0.31 | 0.62 | 0.07 | 0.00 | T | 9 | 0.62 |
| 85 | 0 | 0 | 0 | 51 | 51 | 0.00 | 0.00 | 0.00 | 1.00 | C | 27 | 1.00 |
| 86 | 0 | 10 | 21 | 0 | 31 | 0.00 | 0.32 | 0.68 | 0.00 | G | 19 | 0.68 |
| 87 | 5 | 20 | 0 | 30 | 55 | 0.09 | 0.36 | 0.00 | 0.55 | C | 16 | 0.55 |
| 88 | 5 | 14 | 33 | 14 | 66 | 0.08 | 0.21 | 0.50 | 0.21 | G | 21 | 0.50 |
| 89 | 7 | 24 | 2 | 7 | 40 | 0.17 | 0.60 | 0.05 | 0.17 | T | 18 | 0.60 |
| 90 | 7 | 23 | 7 | 0 | 37 | 0.19 | 0.62 | 0.19 | 0.00 | T | 18 | 0.62 |
| 91 | 6 | 8 | 33 | 8 | 55 | 0.11 | 0.15 | 0.60 | 0.15 | G | 41 | 0.60 |
| 92 | 6 | 22 | 3 | 7 | 38 | 0.16 | 0.58 | 0.08 | 0.18 | T | 30 | 0.58 |
| 93 | 4 | 28 | 0 | 6 | 38 | 0.11 | 0.74 | 0.00 | 0.16 | T | 27 | 0.74 |
| 94 | 0 | 0 | 35 | 10 | 45 | 0.00 | 0.00 | 0.78 | 0.22 | G | 37 | 0.78 |
| 95 | 22 | 0 | 4 | 0 | 26 | 0.85 | 0.00 | 0.15 | 0.00 | A | 16 | 0.85 |
| 96 | 0 | 17 | 4 | 12 | 33 | 0.00 | 0.52 | 0.12 | 0.36 | T | 15 | 0.52 |
| 97 | 8 | 19 | 1 | 3 | 31 | 0.26 | 0.61 | 0.03 | 0.10 | T | 19 | 0.61 |
| 98 | 9 | 4 | 54 | 3 | 70 | 0.13 | 0.06 | 0.77 | 0.04 | G | 51 | 0.77 |
| 99 | 6 | 4 | 19 | 5 | 34 | 0.18 | 0.12 | 0.56 | 0.15 | G | 26 | 0.56 |
| 100 | 0 | 9 | 0 | 6 | 15 | 0.00 | 0.60 | 0.00 | 0.40 | T | 12 | 0.60 |
| 101 | 9 | 16 | 0 | 7 | 32 | 0.28 | 0.50 | 0.00 | 0.22 | T | 30 | 0.50 |
| 102 | 1 | 0 | 40 | 4 | 45 | 0.02 | 0.00 | 0.89 | 0.09 | G | 51 | 0.89 |
| 103 | 1 | 15 | 0 | 2 | 18 | 0.06 | 0.83 | 0.00 | 0.11 | T | 21 | 0.83 |
| 104 | 4 | 2 | 38 | 0 | 44 | 0.09 | 0.05 | 0.86 | 0.00 | G | 50 | 0.86 |
| 105 | 2 | 0 | 22 | 7 | 31 | 0.06 | 0.00 | 0.71 | 0.23 | G | 34 | 0.71 |
| 106 | 0 | 12 | 0 | 0 | 12 | 0.00 | 1.00 | 0.00 | 0.00 | T | 15 | 1.00 |
| 107 | 2 | 5 | 0 | 25 | 32 | 0.06 | 0.16 | 0.00 | 0.78 | C | 36 | 0.78 |
| 108 | 7 | 3 | 23 | 0 | 33 | 0.21 | 0.09 | 0.70 | 0.00 | G | 34 | 0.70 |
| 109 | 10 | 10 | 24 | 3 | 47 | 0.21 | 0.21 | 0.51 | 0.06 | G | 40 | 0.51 |
| 110 | 10 | 8 | 11 | 3 | 32 | 0.31 | 0.25 | 0.34 | 0.09 | N | 14 | 0.34 |
| 111 | 20 | 0 | 0 | 5 | 25 | 0.80 | 0.00 | 0.00 | 0.20 | A | 13 | 0.80 |
| 112 | 7 | 0 | 18 | 4 | 29 | 0.24 | 0.00 | 0.62 | 0.14 | G | 15 | 0.62 |
| 113 | 0 | 7 | 33 | 4 | 44 | 0.00 | 0.16 | 0.75 | 0.09 | G | 34 | 0.75 |
| 114 | 3 | 12 | 17 | 0 | 32 | 0.09 | 0.38 | 0.53 | 0.00 | G | 14 | 0.53 |
| 115 | 1 | 9 | 35 | 5 | 50 | 0.02 | 0.18 | 0.70 | 0.10 | G | 31 | 0.70 |
| 116 | 25 | 0 | 0 | 10 | 35 | 0.71 | 0.00 | 0.00 | 0.29 | A | 27 | 0.71 |
| 117 | 15 | 0 | 1 | 0 | 16 | 0.94 | 0.00 | 0.06 | 0.00 | A | 17 | 0.94 |
| 118 | 0 | 18 | 8 | 4 | 30 | 0.00 | 0.60 | 0.27 | 0.13 | T | 17 | 0.60 |
| 119 | 6 | 25 | 0 | 6 | 37 | 0.16 | 0.68 | 0.00 | 0.16 | T | 34 | 0.68 |
| 120 | 6 | 19 | 6 | 0 | 31 | 0.19 | 0.61 | 0.19 | 0.00 | T | 34 | 0.61 |
| 121 | 1 | 21 | 3 | 2 | 27 | 0.04 | 0.78 | 0.11 | 0.07 | T | 34 | 0.78 |
| 122 | 6 | 19 | 0 | 0 | 25 | 0.24 | 0.76 | 0.00 | 0.00 | T | 30 | 0.76 |
| 123 | 21 | 9 | 3 | 1 | 34 | 0.62 | 0.26 | 0.09 | 0.03 | A | 34 | 0.62 |
| 124 | 6 | 0 | 16 | 4 | 26 | 0.23 | 0.00 | 0.62 | 0.15 | G | 24 | 0.62 |
| 125 | 8 | 11 | 0 | 0 | 19 | 0.42 | 0.58 | 0.00 | 0.00 | T | 16 | 0.58 |
| 126 | 0 | 16 | 3 | 4 | 23 | 0.00 | 0.70 | 0.13 | 0.17 | T | 16 | 0.70 |
| 127 | 17 | 3 | 3 | 14 | 37 | 0.46 | 0.08 | 0.08 | 0.38 | A | 17 | 0.46 |
| 128 | 16 | 1 | 7 | 0 | 24 | 0.67 | 0.04 | 0.29 | 0.00 | A | 13 | 0.67 |
| 129 | 6 | 14 | 3 | 2 | 25 | 0.24 | 0.56 | 0.12 | 0.08 | T | 14 | 0.56 |
| 130 | 0 | 18 | 2 | 16 | 36 | 0.00 | 0.50 | 0.06 | 0.44 | T | 12 | 0.50 |
| 131 | 18 | 10 | 0 | 6 | 34 | 0.53 | 0.29 | 0.00 | 0.18 | A | 16 | 0.53 |
| 132 | 1 | 10 | 10 | 6 | 27 | 0.04 | 0.37 | 0.37 | 0.22 | G | 10 | 0.37 |
| 133 | 6 | 5 | 0 | 15 | 26 | 0.23 | 0.19 | 0.00 | 0.58 | C | 13 | 0.58 |
| 134 | 6 | 6 | 29 | 2 | 43 | 0.14 | 0.14 | 0.67 | 0.05 | G | 30 | 0.67 |
| 135 | 8 | 5 | 22 | 0 | 35 | 0.23 | 0.14 | 0.63 | 0.00 | G | 24 | 0.63 |
| 136 | 0 | 9 | 0 | 18 | 27 | 0.00 | 0.33 | 0.00 | 0.67 | C | 15 | 0.67 |
| 137 | 15 | 8 | 2 | 0 | 25 | 0.60 | 0.32 | 0.08 | 0.00 | A | 12 | 0.60 |
| 138 | 0 | 13 | 0 | 18 | 31 | 0.00 | 0.42 | 0.00 | 0.58 | C | 12 | 0.58 |
| 139 | 5 | 0 | 19 | 7 | 31 | 0.16 | 0.00 | 0.61 | 0.23 | G | 18 | 0.61 |
| 140 | 0 | 5 | 27 | 3 | 35 | 0.00 | 0.14 | 0.77 | 0.09 | G | 27 | 0.77 |
| 141 | 6 | 5 | 19 | 2 | 32 | 0.19 | 0.16 | 0.59 | 0.06 | G | 16 | 0.59 |
| 142 | 9 | 0 | 19 | 2 | 30 | 0.30 | 0.00 | 0.63 | 0.07 | G | 24 | 0.63 |
| 143 | 5 | 0 | 22 | 1 | 28 | 0.18 | 0.00 | 0.79 | 0.04 | G | 30 | 0.79 |
| 144 | 11 | 4 | 20 | 0 | 35 | 0.31 | 0.11 | 0.57 | 0.00 | G | 27 | 0.57 |
| 145 | 0 | 0 | 1 | 21 | 22 | 0.00 | 0.00 | 0.05 | 0.95 | C | 31 | 0.95 |
| 146 | 5 | 10 | 26 | 1 | 42 | 0.12 | 0.24 | 0.62 | 0.02 | G | 34 | 0.62 |
| 147 | 1 | 0 | 36 | 0 | 37 | 0.03 | 0.00 | 0.97 | 0.00 | G | 43 | 0.97 |
| 148 | 2 | 8 | 4 | 6 | 20 | 0.10 | 0.40 | 0.20 | 0.30 | N | 8 | 0.40 |
| 149 | 2 | 0 | 44 | 2 | 48 | 0.04 | 0.00 | 0.92 | 0.04 | G | 44 | 0.92 |
| 150 | 6 | 10 | 0 | 0 | 16 | 0.38 | 0.62 | 0.00 | 0.00 | T | 12 | 0.62 |
| 151 | 9 | 18 | 0 | 0 | 27 | 0.33 | 0.67 | 0.00 | 0.00 | T | 23 | 0.67 |
| 152 | 4 | 24 | 1 | 6 | 35 | 0.11 | 0.69 | 0.03 | 0.17 | T | 18 | 0.69 |
| 153 | 4 | 21 | 11 | 0 | 36 | 0.11 | 0.58 | 0.31 | 0.00 | T | 17 | 0.58 |
| 154 | 2 | 3 | 12 | 17 | 34 | 0.06 | 0.09 | 0.35 | 0.50 | C | 10 | 0.50 |
| 155 | 2 | 8 | 19 | 4 | 33 | 0.06 | 0.24 | 0.58 | 0.12 | G | 11 | 0.58 |
| 156 | 7 | 9 | 30 | 3 | 49 | 0.14 | 0.18 | 0.61 | 0.06 | G | 23 | 0.61 |
| 157 | 0 | 0 | 32 | 14 | 46 | 0.00 | 0.00 | 0.70 | 0.30 | G | 22 | 0.70 |
| 158 | 11 | 5 | 33 | 3 | 52 | 0.21 | 0.10 | 0.63 | 0.06 | G | 22 | 0.63 |
| 159 | 13 | 14 | 18 | 3 | 48 | 0.27 | 0.29 | 0.38 | 0.06 | G | 13 | 0.38 |
| 160 | 0 | 22 | 11 | 11 | 44 | 0.00 | 0.50 | 0.25 | 0.25 | T | 18 | 0.50 |
| 161 | 5 | 12 | 5 | 11 | 33 | 0.15 | 0.36 | 0.15 | 0.33 | N | 8 | 0.36 |
| 162 | 20 | 0 | 4 | 3 | 27 | 0.74 | 0.00 | 0.15 | 0.11 | A | 13 | 0.74 |
| 163 | 5 | 17 | 4 | 3 | 29 | 0.17 | 0.59 | 0.14 | 0.10 | T | 16 | 0.59 |
| 164 | 2 | 19 | 2 | 9 | 32 | 0.06 | 0.59 | 0.06 | 0.28 | T | 23 | 0.59 |
| 165 | 0 | 15 | 2 | 11 | 28 | 0.00 | 0.54 | 0.07 | 0.39 | T | 18 | 0.54 |
| 166 | 9 | 0 | 32 | 0 | 41 | 0.22 | 0.00 | 0.78 | 0.00 | G | 43 | 0.78 |
| 167 | 4 | 0 | 15 | 3 | 22 | 0.18 | 0.00 | 0.68 | 0.14 | G | 18 | 0.68 |
| 168 | 4 | 11 | 3 | 4 | 22 | 0.18 | 0.50 | 0.14 | 0.18 | N | 13 | 0.50 |
| 169 | 0 | 21 | 0 | 6 | 27 | 0.00 | 0.78 | 0.00 | 0.22 | T | 23 | 0.78 |
| 170 | 7 | 0 | 32 | 0 | 39 | 0.18 | 0.00 | 0.82 | 0.00 | G | 34 | 0.82 |
| 171 | 0 | 9 | 0 | 13 | 22 | 0.00 | 0.41 | 0.00 | 0.59 | C | 10 | 0.59 |
| 172 | 15 | 0 | 6 | 0 | 21 | 0.71 | 0.00 | 0.29 | 0.00 | A | 18 | 0.71 |
| 173 | 0 | 2 | 13 | 6 | 21 | 0.00 | 0.10 | 0.62 | 0.29 | G | 13 | 0.62 |
| 174 | 0 | 13 | 2 | 10 | 25 | 0.00 | 0.52 | 0.08 | 0.40 | T | 13 | 0.52 |
| 175 | 3 | 22 | 0 | 9 | 34 | 0.09 | 0.65 | 0.00 | 0.26 | T | 23 | 0.65 |
| 176 | 13 | 10 | 0 | 9 | 32 | 0.41 | 0.31 | 0.00 | 0.28 | A | 9 | 0.41 |
| 177 | 0 | 0 | 0 | 15 | 15 | 0.00 | 0.00 | 0.00 | 1.00 | C | 13 | 1.00 |
| 178 | 0 | 5 | 12 | 4 | 21 | 0.00 | 0.24 | 0.57 | 0.19 | G | 12 | 0.57 |
| 179 | 4 | 18 | 0 | 1 | 23 | 0.17 | 0.78 | 0.00 | 0.04 | T | 20 | 0.78 |
| 180 | 13 | 15 | 0 | 1 | 29 | 0.45 | 0.52 | 0.00 | 0.03 | T | 12 | 0.52 |
| 181 | 1 | 15 | 5 | 8 | 29 | 0.03 | 0.52 | 0.17 | 0.28 | T | 18 | 0.52 |
| 182 | 11 | 13 | 0 | 4 | 28 | 0.39 | 0.46 | 0.00 | 0.14 | T | 16 | 0.46 |
| 183 | 4 | 22 | 0 | 4 | 30 | 0.13 | 0.73 | 0.00 | 0.13 | T | 26 | 0.73 |
| 184 | 4 | 16 | 10 | 1 | 31 | 0.13 | 0.52 | 0.32 | 0.03 | T | 24 | 0.52 |
| 185 | 0 | 18 | 6 | 0 | 24 | 0.00 | 0.75 | 0.25 | 0.00 | T | 23 | 0.75 |
| 186 | 0 | 18 | 6 | 1 | 25 | 0.00 | 0.72 | 0.24 | 0.04 | T | 23 | 0.72 |
| 187 | 10 | 17 | 0 | 10 | 37 | 0.27 | 0.46 | 0.00 | 0.27 | T | 24 | 0.46 |
| 188 | 2 | 11 | 4 | 10 | 27 | 0.07 | 0.41 | 0.15 | 0.37 | T | 13 | 0.41 |
| 189 | 2 | 14 | 2 | 7 | 25 | 0.08 | 0.56 | 0.08 | 0.28 | T | 18 | 0.56 |
| 190 | 9 | 15 | 2 | 2 | 28 | 0.32 | 0.54 | 0.07 | 0.07 | T | 18 | 0.54 |
| 191 | 0 | 10 | 7 | 5 | 22 | 0.00 | 0.45 | 0.32 | 0.23 | T | 18 | 0.45 |
| 192 | 10 | 8 | 4 | 0 | 22 | 0.45 | 0.36 | 0.18 | 0.00 | A | 11 | 0.45 |
| 193 | 1 | 1 | 25 | 9 | 36 | 0.03 | 0.03 | 0.69 | 0.25 | G | 35 | 0.69 |
| 194 | 0 | 8 | 11 | 0 | 19 | 0.00 | 0.42 | 0.58 | 0.00 | G | 8 | 0.58 |
| 195 | 8 | 0 | 2 | 12 | 22 | 0.36 | 0.00 | 0.09 | 0.55 | C | 11 | 0.55 |
| 196 | 0 | 2 | 16 | 8 | 26 | 0.00 | 0.08 | 0.62 | 0.31 | G | 8 | 0.62 |
| 197 | 0 | 13 | 0 | 11 | 24 | 0.00 | 0.54 | 0.00 | 0.46 | T | 13 | 0.54 |
| 198 | 3 | 11 | 0 | 12 | 26 | 0.12 | 0.42 | 0.00 | 0.46 | C | 10 | 0.46 |
| 199 | 3 | 1 | 22 | 1 | 27 | 0.11 | 0.04 | 0.81 | 0.04 | G | 18 | 0.81 |
| 200 | 2 | 0 | 14 | 7 | 23 | 0.09 | 0.00 | 0.61 | 0.30 | G | 18 | 0.61 |
| 201 | 21 | 0 | 0 | 8 | 29 | 0.72 | 0.00 | 0.00 | 0.28 | A | 34 | 0.72 |
| 202 | 9 | 8 | 0 | 6 | 23 | 0.39 | 0.35 | 0.00 | 0.26 | A | 12 | 0.39 |
| 203 | 5 | 7 | 2 | 4 | 18 | 0.28 | 0.39 | 0.11 | 0.22 | N | 9 | 0.39 |
| 204 | 9 | 7 | 6 | 0 | 22 | 0.41 | 0.32 | 0.27 | 0.00 | A | 11 | 0.41 |
| 205 | 1 | 2 | 16 | 13 | 32 | 0.03 | 0.06 | 0.50 | 0.41 | G | 18 | 0.50 |
| 206 | 0 | 6 | 4 | 0 | 10 | 0.00 | 0.60 | 0.40 | 0.00 | T | 8 | 0.60 |
| 207 | 9 | 0 | 3 | 3 | 15 | 0.60 | 0.00 | 0.20 | 0.20 | A | 8 | 0.60 |
| 208 | 9 | 7 | 1 | 7 | 24 | 0.38 | 0.29 | 0.04 | 0.29 | A | 10 | 0.38 |
| 209 | 16 | 2 | 4 | 8 | 30 | 0.53 | 0.07 | 0.13 | 0.27 | A | 24 | 0.53 |
| 210 | 2 | 0 | 14 | 0 | 16 | 0.12 | 0.00 | 0.88 | 0.00 | G | 24 | 0.88 |
| 211 | 1 | 11 | 0 | 10 | 22 | 0.05 | 0.50 | 0.00 | 0.45 | T | 13 | 0.50 |
| 212 | 16 | 0 | 0 | 0 | 16 | 1.00 | 0.00 | 0.00 | 0.00 | A | 23 | 1.00 |
| 213 | 8 | 12 | 0 | 3 | 23 | 0.35 | 0.52 | 0.00 | 0.13 | T | 17 | 0.52 |
| 214 | 0 | 8 | 0 | 17 | 25 | 0.00 | 0.32 | 0.00 | 0.68 | C | 13 | 0.68 |
| 215 | 3 | 8 | 2 | 9 | 22 | 0.14 | 0.36 | 0.09 | 0.41 | C | 11 | 0.41 |
| 216 | 2 | 10 | 16 | 5 | 33 | 0.06 | 0.30 | 0.48 | 0.15 | G | 9 | 0.48 |
| 217 | 6 | 3 | 6 | 7 | 22 | 0.27 | 0.14 | 0.27 | 0.32 | N | 8 | 0.32 |
| 218 | 0 | 3 | 15 | 7 | 25 | 0.00 | 0.12 | 0.60 | 0.28 | G | 13 | 0.60 |
| 219 | 21 | 2 | 6 | 3 | 32 | 0.66 | 0.06 | 0.19 | 0.09 | A | 34 | 0.66 |
| 220 | 0 | 5 | 12 | 2 | 19 | 0.00 | 0.26 | 0.63 | 0.11 | G | 18 | 0.63 |
| 221 | 4 | 12 | 2 | 8 | 26 | 0.15 | 0.46 | 0.08 | 0.31 | T | 24 | 0.46 |
| 222 | 4 | 21 | 0 | 0 | 25 | 0.16 | 0.84 | 0.00 | 0.00 | T | 34 | 0.84 |
| 223 | 3 | 8 | 5 | 11 | 27 | 0.11 | 0.30 | 0.19 | 0.41 | N | 18 | 0.41 |
| 224 | 8 | 0 | 5 | 13 | 26 | 0.31 | 0.00 | 0.19 | 0.50 | C | 23 | 0.50 |
| 225 | 0 | 5 | 5 | 16 | 26 | 0.00 | 0.19 | 0.19 | 0.62 | C | 19 | 0.62 |
| 226 | 6 | 10 | 0 | 6 | 22 | 0.27 | 0.45 | 0.00 | 0.27 | T | 12 | 0.45 |
| 227 | 1 | 0 | 9 | 25 | 35 | 0.03 | 0.00 | 0.26 | 0.71 | C | 34 | 0.71 |
| 228 | 1 | 2 | 12 | 6 | 21 | 0.05 | 0.10 | 0.57 | 0.29 | G | 9 | 0.57 |
| 229 | 10 | 9 | 0 | 10 | 29 | 0.34 | 0.31 | 0.00 | 0.34 | A | 7 | 0.34 |
| 230 | 0 | 4 | 7 | 6 | 17 | 0.00 | 0.24 | 0.41 | 0.35 | G | 10 | 0.41 |
| 231 | 0 | 11 | 7 | 6 | 24 | 0.00 | 0.46 | 0.29 | 0.25 | T | 10 | 0.46 |
| 232 | 3 | 5 | 27 | 12 | 47 | 0.06 | 0.11 | 0.57 | 0.26 | G | 27 | 0.57 |
| 233 | 4 | 9 | 8 | 1 | 22 | 0.18 | 0.41 | 0.36 | 0.05 | T | 10 | 0.41 |
| 234 | 9 | 7 | 18 | 4 | 38 | 0.24 | 0.18 | 0.47 | 0.11 | G | 13 | 0.47 |
| 235 | 9 | 8 | 3 | 12 | 32 | 0.28 | 0.25 | 0.09 | 0.38 | N | 11 | 0.38 |
| 236 | 18 | 4 | 2 | 12 | 36 | 0.50 | 0.11 | 0.06 | 0.33 | A | 10 | 0.50 |
| 237 | 0 | 10 | 2 | 0 | 12 | 0.00 | 0.83 | 0.17 | 0.00 | T | 10 | 0.83 |
| 238 | 4 | 9 | 0 | 4 | 17 | 0.24 | 0.53 | 0.00 | 0.24 | T | 9 | 0.53 |
| 239 | 11 | 0 | 0 | 14 | 25 | 0.44 | 0.00 | 0.00 | 0.56 | C | 9 | 0.56 |
| 240 | 4 | 3 | 7 | 0 | 14 | 0.29 | 0.21 | 0.50 | 0.00 | G | 9 | 0.50 |
| 241 | 21 | 0 | 2 | 8 | 31 | 0.68 | 0.00 | 0.06 | 0.26 | A | 25 | 0.68 |
| 242 | 17 | 2 | 0 | 12 | 31 | 0.55 | 0.06 | 0.00 | 0.39 | A | 18 | 0.55 |
| 243 | 0 | 2 | 2 | 5 | 9 | 0.00 | 0.22 | 0.22 | 0.56 | C | 11 | 0.56 |
| 244 | 9 | 5 | 0 | 0 | 14 | 0.64 | 0.36 | 0.00 | 0.00 | A | 12 | 0.64 |
| 245 | 0 | 0 | 4 | 8 | 12 | 0.00 | 0.00 | 0.33 | 0.67 | C | 11 | 0.67 |
| 246 | 0 | 13 | 1 | 1 | 15 | 0.00 | 0.87 | 0.07 | 0.07 | T | 13 | 0.87 |
| 247 | 5 | 12 | 4 | 2 | 23 | 0.22 | 0.52 | 0.17 | 0.09 | T | 13 | 0.52 |
| 248 | 14 | 11 | 2 | 8 | 35 | 0.40 | 0.31 | 0.06 | 0.23 | A | 18 | 0.40 |
| 249 | 14 | 3 | 0 | 0 | 17 | 0.82 | 0.18 | 0.00 | 0.00 | A | 18 | 0.82 |
| 250 | 0 | 2 | 7 | 0 | 9 | 0.00 | 0.22 | 0.78 | 0.00 | G | 10 | 0.78 |
| 251 | 2 | 5 | 0 | 4 | 11 | 0.18 | 0.45 | 0.00 | 0.36 | T | 10 | 0.45 |
| 252 | 0 | 6 | 7 | 3 | 16 | 0.00 | 0.38 | 0.44 | 0.19 | G | 12 | 0.44 |
| 253 | 5 | 0 | 5 | 0 | 10 | 0.50 | 0.00 | 0.50 | 0.00 | A | 10 | 0.50 |
| 254 | 9 | 1 | 1 | 4 | 15 | 0.60 | 0.07 | 0.07 | 0.27 | A | 18 | 0.60 |
| 255 | 0 | 1 | 4 | 2 | 7 | 0.00 | 0.14 | 0.57 | 0.29 | G | 11 | 0.57 |
| 256 | 0 | 3 | 8 | 4 | 15 | 0.00 | 0.20 | 0.53 | 0.27 | G | 16 | 0.53 |
| 257 | 0 | 0 | 10 | 0 | 10 | 0.00 | 0.00 | 1.00 | 0.00 | G | 24 | 1.00 |
| 258 | 5 | 5 | 0 | 3 | 13 | 0.38 | 0.38 | 0.00 | 0.23 | A | 12 | 0.38 |
| 259 | 0 | 9 | 1 | 6 | 16 | 0.00 | 0.56 | 0.06 | 0.38 | T | 18 | 0.56 |
| 260 | 3 | 0 | 7 | 3 | 13 | 0.23 | 0.00 | 0.54 | 0.23 | G | 13 | 0.54 |
| 261 | 5 | 7 | 1 | 2 | 15 | 0.33 | 0.47 | 0.07 | 0.13 | T | 11 | 0.47 |
| 262 | 10 | 0 | 3 | 6 | 19 | 0.53 | 0.00 | 0.16 | 0.32 | A | 19 | 0.53 |
| 263 | 0 | 10 | 3 | 7 | 20 | 0.00 | 0.50 | 0.15 | 0.35 | T | 19 | 0.50 |
| 264 | 4 | 9 | 4 | 2 | 19 | 0.21 | 0.47 | 0.21 | 0.11 | T | 13 | 0.47 |
| 265 | 0 | 9 | 1 | 8 | 18 | 0.00 | 0.50 | 0.06 | 0.44 | T | 13 | 0.50 |
| 266 | 6 | 6 | 0 | 3 | 15 | 0.40 | 0.40 | 0.00 | 0.20 | A | 11 | 0.40 |
| 267 | 4 | 9 | 3 | 4 | 20 | 0.20 | 0.45 | 0.15 | 0.20 | N | 19 | 0.45 |
| 268 | 3 | 7 | 0 | 4 | 14 | 0.21 | 0.50 | 0.00 | 0.29 | T | 13 | 0.50 |
| 269 | 9 | 0 | 1 | 4 | 14 | 0.64 | 0.00 | 0.07 | 0.29 | A | 19 | 0.64 |
| 270 | 0 | 5 | 2 | 1 | 8 | 0.00 | 0.62 | 0.25 | 0.12 | T | 8 | 0.62 |
| 271 | 11 | 0 | 2 | 5 | 18 | 0.61 | 0.00 | 0.11 | 0.28 | A | 14 | 0.61 |
| 272 | 3 | 6 | 1 | 7 | 17 | 0.18 | 0.35 | 0.06 | 0.41 | C | 13 | 0.41 |
| 273 | 1 | 10 | 1 | 0 | 12 | 0.08 | 0.83 | 0.08 | 0.00 | T | 18 | 0.83 |
| 274 | 8 | 7 | 0 | 5 | 20 | 0.40 | 0.35 | 0.00 | 0.25 | A | 13 | 0.40 |
| 275 | 0 | 4 | 5 | 8 | 17 | 0.00 | 0.24 | 0.29 | 0.47 | C | 13 | 0.47 |
| 276 | 4 | 0 | 0 | 4 | 8 | 0.50 | 0.00 | 0.00 | 0.50 | A | 10 | 0.50 |
| 277 | 5 | 1 | 2 | 8 | 16 | 0.31 | 0.06 | 0.12 | 0.50 | C | 10 | 0.50 |
| 278 | 4 | 4 | 2 | 8 | 18 | 0.22 | 0.22 | 0.11 | 0.44 | N | 13 | 0.44 |
| 279 | 0 | 4 | 4 | 6 | 14 | 0.00 | 0.29 | 0.29 | 0.43 | C | 11 | 0.43 |
| 280 | 4 | 4 | 0 | 8 | 16 | 0.25 | 0.25 | 0.00 | 0.50 | C | 10 | 0.50 |
| 281 | 4 | 7 | 3 | 5 | 19 | 0.21 | 0.37 | 0.16 | 0.26 | N | 12 | 0.37 |
| 282 | 1 | 1 | 7 | 7 | 16 | 0.06 | 0.06 | 0.44 | 0.44 | C | 9 | 0.44 |
| 283 | 1 | 8 | 3 | 4 | 16 | 0.06 | 0.50 | 0.19 | 0.25 | T | 9 | 0.50 |
| 284 | 6 | 0 | 3 | 5 | 14 | 0.43 | 0.00 | 0.21 | 0.36 | A | 10 | 0.43 |
| 285 | 2 | 8 | 1 | 6 | 17 | 0.12 | 0.47 | 0.06 | 0.35 | T | 16 | 0.47 |
| 286 | 3 | 1 | 1 | 10 | 15 | 0.20 | 0.07 | 0.07 | 0.67 | C | 14 | 0.67 |
| 287 | 2 | 6 | 1 | 10 | 19 | 0.11 | 0.32 | 0.05 | 0.53 | C | 13 | 0.53 |
| 288 | 1 | 4 | 7 | 7 | 19 | 0.05 | 0.21 | 0.37 | 0.37 | C | 13 | 0.37 |
| 289 | 0 | 10 | 5 | 4 | 19 | 0.00 | 0.53 | 0.26 | 0.21 | T | 18 | 0.53 |
| 290 | 4 | 11 | 0 | 0 | 15 | 0.27 | 0.73 | 0.00 | 0.00 | T | 23 | 0.73 |
| 291 | 2 | 4 | 2 | 11 | 19 | 0.11 | 0.21 | 0.11 | 0.58 | C | 23 | 0.58 |
| 292 | 0 | 3 | 5 | 1 | 9 | 0.00 | 0.33 | 0.56 | 0.11 | G | 12 | 0.56 |
| 293 | 2 | 5 | 3 | 1 | 11 | 0.18 | 0.45 | 0.27 | 0.09 | T | 10 | 0.45 |
| 294 | 5 | 5 | 4 | 4 | 18 | 0.28 | 0.28 | 0.22 | 0.22 | N | 10 | 0.28 |
| 295 | 0 | 1 | 5 | 1 | 7 | 0.00 | 0.14 | 0.71 | 0.14 | G | 10 | 0.71 |
| 296 | 17 | 0 | 2 | 1 | 20 | 0.85 | 0.00 | 0.10 | 0.05 | A | 29 | 0.85 |
| 297 | 0 | 5 | 2 | 7 | 14 | 0.00 | 0.36 | 0.14 | 0.50 | C | 13 | 0.50 |
| 298 | 2 | 9 | 0 | 7 | 18 | 0.11 | 0.50 | 0.00 | 0.39 | T | 17 | 0.50 |
| 299 | 3 | 7 | 0 | 5 | 15 | 0.20 | 0.47 | 0.00 | 0.33 | T | 13 | 0.47 |
| 300 | 0 | 0 | 8 | 4 | 12 | 0.00 | 0.00 | 0.67 | 0.33 | G | 18 | 0.67 |
| 301 | 4 | 2 | 0 | 6 | 12 | 0.33 | 0.17 | 0.00 | 0.50 | C | 11 | 0.50 |
| 302 | 9 | 1 | 0 | 2 | 12 | 0.75 | 0.08 | 0.00 | 0.17 | A | 18 | 0.75 |
| 303 | 1 | 2 | 4 | 0 | 7 | 0.14 | 0.29 | 0.57 | 0.00 | G | 18 | 0.57 |
| 304 | 2 | 0 | 12 | 0 | 14 | 0.14 | 0.00 | 0.86 | 0.00 | G | 34 | 0.86 |
| 305 | 3 | 6 | 0 | 2 | 11 | 0.27 | 0.55 | 0.00 | 0.18 | T | 19 | 0.55 |
| 306 | 0 | 0 | 6 | 4 | 10 | 0.00 | 0.00 | 0.60 | 0.40 | G | 16 | 0.60 |
| 307 | 9 | 3 | 0 | 2 | 14 | 0.64 | 0.21 | 0.00 | 0.14 | A | 24 | 0.64 |
| 308 | 3 | 0 | 0 | 9 | 12 | 0.25 | 0.00 | 0.00 | 0.75 | C | 23 | 0.75 |
| 309 | 3 | 6 | 1 | 3 | 13 | 0.23 | 0.46 | 0.08 | 0.23 | T | 13 | 0.46 |
| 310 | 0 | 0 | 3 | 12 | 15 | 0.00 | 0.00 | 0.20 | 0.80 | C | 27 | 0.80 |
| 311 | 4 | 6 | 2 | 0 | 12 | 0.33 | 0.50 | 0.17 | 0.00 | T | 13 | 0.50 |
| 312 | 0 | 8 | 0 | 6 | 14 | 0.00 | 0.57 | 0.00 | 0.43 | T | 13 | 0.57 |
| 313 | 6 | 0 | 10 | 0 | 16 | 0.38 | 0.00 | 0.62 | 0.00 | G | 18 | 0.62 |
| 314 | 10 | 0 | 0 | 2 | 12 | 0.83 | 0.00 | 0.00 | 0.17 | A | 19 | 0.83 |
| 315 | 0 | 13 | 0 | 7 | 20 | 0.00 | 0.65 | 0.00 | 0.35 | T | 23 | 0.65 |
| 316 | 6 | 3 | 2 | 4 | 15 | 0.40 | 0.20 | 0.13 | 0.27 | N | 8 | 0.40 |
| 317 | 12 | 2 | 0 | 0 | 14 | 0.86 | 0.14 | 0.00 | 0.00 | A | 24 | 0.86 |
| 318 | 0 | 3 | 0 | 13 | 16 | 0.00 | 0.19 | 0.00 | 0.81 | C | 26 | 0.81 |
| 319 | 2 | 6 | 4 | 3 | 15 | 0.13 | 0.40 | 0.27 | 0.20 | N | 13 | 0.40 |
| 320 | 10 | 3 | 4 | 0 | 17 | 0.59 | 0.18 | 0.24 | 0.00 | A | 23 | 0.59 |
| 321 | 1 | 8 | 6 | 2 | 17 | 0.06 | 0.47 | 0.35 | 0.12 | T | 18 | 0.47 |
| 322 | 2 | 8 | 2 | 1 | 13 | 0.15 | 0.62 | 0.15 | 0.08 | T | 18 | 0.62 |
| 323 | 2 | 4 | 3 | 11 | 20 | 0.10 | 0.20 | 0.15 | 0.55 | C | 17 | 0.55 |
| 324 | 2 | 2 | 3 | 5 | 12 | 0.17 | 0.17 | 0.25 | 0.42 | N | 10 | 0.42 |
| 325 | 1 | 4 | 5 | 5 | 15 | 0.07 | 0.27 | 0.33 | 0.33 | C | 6 | 0.33 |
| 326 | 14 | 5 | 5 | 0 | 24 | 0.58 | 0.21 | 0.21 | 0.00 | A | 15 | 0.58 |
| 327 | 1 | 3 | 5 | 8 | 17 | 0.06 | 0.18 | 0.29 | 0.47 | C | 13 | 0.47 |
| 328 | 1 | 0 | 2 | 8 | 11 | 0.09 | 0.00 | 0.18 | 0.73 | C | 10 | 0.73 |
| 329 | 6 | 8 | 4 | 2 | 20 | 0.30 | 0.40 | 0.20 | 0.10 | N | 9 | 0.40 |
| 330 | 0 | 3 | 4 | 6 | 13 | 0.00 | 0.23 | 0.31 | 0.46 | C | 12 | 0.46 |
| 331 | 6 | 3 | 6 | 0 | 15 | 0.40 | 0.20 | 0.40 | 0.00 | A | 12 | 0.40 |
| 332 | 3 | 3 | 0 | 0 | 6 | 0.50 | 0.50 | 0.00 | 0.00 | A | 10 | 0.50 |
| 333 | 0 | 3 | 8 | 2 | 13 | 0.00 | 0.23 | 0.62 | 0.15 | G | 13 | 0.62 |
| 334 | 0 | 6 | 3 | 8 | 17 | 0.00 | 0.35 | 0.18 | 0.47 | C | 18 | 0.47 |
| 335 | 0 | 6 | 3 | 9 | 18 | 0.00 | 0.33 | 0.17 | 0.50 | C | 18 | 0.50 |
| 336 | 4 | 7 | 2 | 0 | 13 | 0.31 | 0.54 | 0.15 | 0.00 | T | 12 | 0.54 |
| 337 | 2 | 11 | 0 | 0 | 13 | 0.15 | 0.85 | 0.00 | 0.00 | T | 21 | 0.85 |
| 338 | 0 | 0 | 6 | 12 | 18 | 0.00 | 0.00 | 0.33 | 0.67 | C | 21 | 0.67 |
| 339 | 3 | 1 | 0 | 2 | 6 | 0.50 | 0.17 | 0.00 | 0.33 | A | 8 | 0.50 |
| 340 | 0 | 0 | 10 | 5 | 15 | 0.00 | 0.00 | 0.67 | 0.33 | G | 18 | 0.67 |
| 341 | 3 | 0 | 5 | 7 | 15 | 0.20 | 0.00 | 0.33 | 0.47 | C | 11 | 0.47 |
| 342 | 1 | 3 | 3 | 5 | 12 | 0.08 | 0.25 | 0.25 | 0.42 | C | 8 | 0.42 |
| 343 | 0 | 2 | 6 | 5 | 13 | 0.00 | 0.15 | 0.46 | 0.38 | G | 11 | 0.46 |
| 344 | 1 | 4 | 5 | 6 | 16 | 0.06 | 0.25 | 0.31 | 0.38 | C | 13 | 0.38 |
| 345 | 0 | 4 | 2 | 6 | 12 | 0.00 | 0.33 | 0.17 | 0.50 | C | 18 | 0.50 |
| 346 | 2 | 5 | 4 | 5 | 16 | 0.12 | 0.31 | 0.25 | 0.31 | N | 13 | 0.31 |
| 347 | 2 | 0 | 3 | 5 | 10 | 0.20 | 0.00 | 0.30 | 0.50 | C | 11 | 0.50 |
| 348 | 1 | 3 | 3 | 5 | 12 | 0.08 | 0.25 | 0.25 | 0.42 | C | 13 | 0.42 |
| 349 | 1 | 4 | 10 | 2 | 17 | 0.06 | 0.24 | 0.59 | 0.12 | G | 23 | 0.59 |
| 350 | 1 | 4 | 4 | 9 | 18 | 0.06 | 0.22 | 0.22 | 0.50 | C | 18 | 0.50 |
| 351 | 6 | 8 | 2 | 0 | 16 | 0.38 | 0.50 | 0.12 | 0.00 | T | 23 | 0.50 |
| 352 | 0 | 11 | 2 | 1 | 14 | 0.00 | 0.79 | 0.14 | 0.07 | T | 23 | 0.79 |
| 353 | 4 | 0 | 2 | 13 | 19 | 0.21 | 0.00 | 0.11 | 0.68 | C | 27 | 0.68 |
| 354 | 7 | 4 | 0 | 1 | 12 | 0.58 | 0.33 | 0.00 | 0.08 | A | 13 | 0.58 |
| 355 | 2 | 10 | 0 | 4 | 16 | 0.12 | 0.62 | 0.00 | 0.25 | T | 27 | 0.62 |
| 356 | 1 | 13 | 2 | 1 | 17 | 0.06 | 0.76 | 0.12 | 0.06 | T | 35 | 0.76 |
| 357 | 0 | 0 | 0 | 13 | 13 | 0.00 | 0.00 | 0.00 | 1.00 | C | 36 | 1.00 |
| 358 | 5 | 4 | 5 | 0 | 14 | 0.36 | 0.29 | 0.36 | 0.00 | A | 12 | 0.36 |
| 359 | 5 | 0 | 7 | 3 | 15 | 0.33 | 0.00 | 0.47 | 0.20 | G | 11 | 0.47 |
| 360 | 6 | 1 | 3 | 0 | 10 | 0.60 | 0.10 | 0.30 | 0.00 | A | 13 | 0.60 |
| 361 | 0 | 8 | 6 | 2 | 16 | 0.00 | 0.50 | 0.38 | 0.12 | T | 18 | 0.50 |
| 362 | 4 | 11 | 0 | 2 | 17 | 0.24 | 0.65 | 0.00 | 0.12 | T | 24 | 0.65 |
| 363 | 1 | 12 | 3 | 0 | 16 | 0.06 | 0.75 | 0.19 | 0.00 | T | 23 | 0.75 |
| 364 | 1 | 6 | 0 | 8 | 15 | 0.07 | 0.40 | 0.00 | 0.53 | C | 11 | 0.53 |
| 365 | 1 | 7 | 8 | 5 | 21 | 0.05 | 0.33 | 0.38 | 0.24 | G | 13 | 0.38 |
| 366 | 2 | 0 | 8 | 0 | 10 | 0.20 | 0.00 | 0.80 | 0.00 | G | 11 | 0.80 |
| 367 | 4 | 1 | 0 | 5 | 10 | 0.40 | 0.10 | 0.00 | 0.50 | C | 11 | 0.50 |
| 368 | 1 | 2 | 1 | 9 | 13 | 0.08 | 0.15 | 0.08 | 0.69 | C | 26 | 0.69 |
| 369 | 1 | 0 | 4 | 8 | 13 | 0.08 | 0.00 | 0.31 | 0.62 | C | 24 | 0.62 |
| 370 | 6 | 5 | 0 | 0 | 11 | 0.55 | 0.45 | 0.00 | 0.00 | A | 12 | 0.55 |
| 371 | 7 | 0 | 4 | 0 | 11 | 0.64 | 0.00 | 0.36 | 0.00 | A | 11 | 0.64 |
| 372 | 0 | 6 | 4 | 5 | 15 | 0.00 | 0.40 | 0.27 | 0.33 | T | 13 | 0.40 |
| 373 | 0 | 3 | 6 | 8 | 17 | 0.00 | 0.18 | 0.35 | 0.47 | C | 13 | 0.47 |
| 374 | 5 | 3 | 4 | 0 | 12 | 0.42 | 0.25 | 0.33 | 0.00 | A | 9 | 0.42 |
| 375 | 5 | 3 | 2 | 1 | 11 | 0.45 | 0.27 | 0.18 | 0.09 | A | 10 | 0.45 |
| 376 | 1 | 6 | 0 | 7 | 14 | 0.07 | 0.43 | 0.00 | 0.50 | C | 17 | 0.50 |
| 377 | 1 | 11 | 3 | 6 | 21 | 0.05 | 0.52 | 0.14 | 0.29 | T | 26 | 0.52 |
| 378 | 1 | 9 | 0 | 2 | 12 | 0.08 | 0.75 | 0.00 | 0.17 | T | 17 | 0.75 |
| 379 | 4 | 10 | 1 | 0 | 15 | 0.27 | 0.67 | 0.07 | 0.00 | T | 23 | 0.67 |
| 380 | 5 | 3 | 1 | 9 | 18 | 0.28 | 0.17 | 0.06 | 0.50 | C | 23 | 0.50 |
| 381 | 5 | 5 | 4 | 0 | 14 | 0.36 | 0.36 | 0.29 | 0.00 | A | 7 | 0.36 |
| 382 | 7 | 0 | 0 | 0 | 7 | 1.00 | 0.00 | 0.00 | 0.00 | A | 13 | 1.00 |
| 383 | 4 | 6 | 0 | 3 | 13 | 0.31 | 0.46 | 0.00 | 0.23 | T | 13 | 0.46 |
| 384 | 5 | 1 | 7 | 3 | 16 | 0.31 | 0.06 | 0.44 | 0.19 | G | 16 | 0.44 |
| 385 | 0 | 4 | 4 | 0 | 8 | 0.00 | 0.50 | 0.50 | 0.00 | G | 6 | 0.50 |
| 386 | 0 | 4 | 4 | 0 | 8 | 0.00 | 0.50 | 0.50 | 0.00 | G | 13 | 0.50 |
| 387 | 8 | 0 | 0 | 3 | 11 | 0.73 | 0.00 | 0.00 | 0.27 | A | 23 | 0.73 |
| 388 | 0 | 0 | 3 | 3 | 6 | 0.00 | 0.00 | 0.50 | 0.50 | C | 7 | 0.50 |
| 389 | 0 | 4 | 4 | 2 | 10 | 0.00 | 0.40 | 0.40 | 0.20 | G | 8 | 0.40 |
| 390 | 5 | 10 | 0 | 0 | 15 | 0.33 | 0.67 | 0.00 | 0.00 | T | 8 | 0.67 |
| 391 | 0 | 0 | 7 | 6 | 13 | 0.00 | 0.00 | 0.54 | 0.46 | G | 13 | 0.54 |
| 392 | 4 | 4 | 0 | 4 | 12 | 0.33 | 0.33 | 0.00 | 0.33 | A | 8 | 0.33 |
| 393 | 3 | 3 | 2 | 0 | 8 | 0.38 | 0.38 | 0.25 | 0.00 | A | 11 | 0.38 |
| 394 | 10 | 0 | 0 | 3 | 13 | 0.77 | 0.00 | 0.00 | 0.23 | A | 16 | 0.77 |
| 395 | 0 | 0 | 4 | 3 | 7 | 0.00 | 0.00 | 0.57 | 0.43 | G | 11 | 0.57 |
| 396 | 8 | 2 | 0 | 0 | 10 | 0.80 | 0.20 | 0.00 | 0.00 | A | 30 | 0.80 |
| 397 | 13 | 3 | 4 | 0 | 20 | 0.65 | 0.15 | 0.20 | 0.00 | A | 34 | 0.65 |
| 398 | 1 | 3 | 2 | 10 | 16 | 0.06 | 0.19 | 0.12 | 0.62 | C | 23 | 0.62 |
| 399 | 0 | 10 | 2 | 0 | 12 | 0.00 | 0.83 | 0.17 | 0.00 | T | 30 | 0.83 |
| 400 | 10 | 0 | 3 | 5 | 18 | 0.56 | 0.00 | 0.17 | 0.28 | A | 30 | 0.56 |
| 401 | 2 | 4 | 1 | 5 | 12 | 0.17 | 0.33 | 0.08 | 0.42 | C | 11 | 0.42 |
| 402 | 1 | 0 | 4 | 8 | 13 | 0.08 | 0.00 | 0.31 | 0.62 | C | 26 | 0.62 |
| 403 | 3 | 0 | 2 | 5 | 10 | 0.30 | 0.00 | 0.20 | 0.50 | C | 14 | 0.50 |
| 404 | 5 | 6 | 0 | 1 | 12 | 0.42 | 0.50 | 0.00 | 0.08 | T | 23 | 0.50 |
| 405 | 0 | 3 | 11 | 3 | 17 | 0.00 | 0.18 | 0.65 | 0.18 | G | 32 | 0.65 |
| 406 | 6 | 0 | 5 | 5 | 16 | 0.38 | 0.00 | 0.31 | 0.31 | A | 21 | 0.38 |
| 407 | 4 | 5 | 1 | 0 | 10 | 0.40 | 0.50 | 0.10 | 0.00 | T | 13 | 0.50 |
| 408 | 0 | 6 | 1 | 0 | 7 | 0.00 | 0.86 | 0.14 | 0.00 | T | 11 | 0.86 |
| 409 | 4 | 0 | 0 | 6 | 10 | 0.40 | 0.00 | 0.00 | 0.60 | C | 11 | 0.60 |
| 410 | 4 | 0 | 3 | 6 | 13 | 0.31 | 0.00 | 0.23 | 0.46 | C | 12 | 0.46 |
| 411 | 6 | 3 | 0 | 2 | 11 | 0.55 | 0.27 | 0.00 | 0.18 | A | 13 | 0.55 |
| 412 | 3 | 3 | 0 | 6 | 12 | 0.25 | 0.25 | 0.00 | 0.50 | C | 11 | 0.50 |
| 413 | 3 | 0 | 4 | 4 | 11 | 0.27 | 0.00 | 0.36 | 0.36 | C | 11 | 0.36 |
| 414 | 0 | 1 | 4 | 3 | 8 | 0.00 | 0.12 | 0.50 | 0.38 | G | 10 | 0.50 |
| 415 | 4 | 0 | 3 | 3 | 10 | 0.40 | 0.00 | 0.30 | 0.30 | A | 10 | 0.40 |
| 416 | 2 | 3 | 1 | 3 | 9 | 0.22 | 0.33 | 0.11 | 0.33 | N | 9 | 0.33 |
| 417 | 5 | 3 | 0 | 0 | 8 | 0.62 | 0.38 | 0.00 | 0.00 | A | 13 | 0.62 |
| 418 | 5 | 0 | 9 | 0 | 14 | 0.36 | 0.00 | 0.64 | 0.00 | G | 21 | 0.64 |
| 419 | 1 | 2 | 0 | 8 | 11 | 0.09 | 0.18 | 0.00 | 0.73 | C | 21 | 0.73 |
| 420 | 2 | 0 | 5 | 0 | 7 | 0.29 | 0.00 | 0.71 | 0.00 | G | 11 | 0.71 |
| 421 | 1 | 2 | 7 | 2 | 12 | 0.08 | 0.17 | 0.58 | 0.17 | G | 19 | 0.58 |
| 422 | 7 | 2 | 3 | 4 | 16 | 0.44 | 0.12 | 0.19 | 0.25 | N | 15 | 0.44 |
| 423 | 0 | 0 | 1 | 7 | 8 | 0.00 | 0.00 | 0.12 | 0.88 | C | 14 | 0.88 |
| 424 | 9 | 4 | 0 | 4 | 17 | 0.53 | 0.24 | 0.00 | 0.24 | A | 13 | 0.53 |
| 425 | 4 | 0 | 4 | 6 | 14 | 0.29 | 0.00 | 0.29 | 0.43 | C | 11 | 0.43 |
| 426 | 2 | 5 | 1 | 6 | 14 | 0.14 | 0.36 | 0.07 | 0.43 | C | 12 | 0.43 |
| 427 | 0 | 12 | 0 | 0 | 12 | 0.00 | 1.00 | 0.00 | 0.00 | T | 27 | 1.00 |
| 428 | 10 | 0 | 3 | 4 | 17 | 0.59 | 0.00 | 0.18 | 0.24 | A | 22 | 0.59 |
| 429 | 1 | 5 | 2 | 0 | 8 | 0.12 | 0.62 | 0.25 | 0.00 | T | 12 | 0.62 |
| 430 | 6 | 5 | 3 | 0 | 14 | 0.43 | 0.36 | 0.21 | 0.00 | A | 13 | 0.43 |
| 431 | 3 | 0 | 4 | 3 | 10 | 0.30 | 0.00 | 0.40 | 0.30 | G | 8 | 0.40 |
| 432 | 0 | 0 | 0 | 3 | 3 | 0.00 | 0.00 | 0.00 | 1.00 | C | 8 | 1.00 |
| 433 | 1 | 8 | 2 | 2 | 13 | 0.08 | 0.62 | 0.15 | 0.15 | T | 19 | 0.62 |
| 434 | 2 | 10 | 2 | 4 | 18 | 0.11 | 0.56 | 0.11 | 0.22 | T | 23 | 0.56 |
| 435 | 3 | 1 | 7 | 2 | 13 | 0.23 | 0.08 | 0.54 | 0.15 | G | 17 | 0.54 |
| 436 | 9 | 1 | 0 | 6 | 16 | 0.56 | 0.06 | 0.00 | 0.38 | A | 18 | 0.56 |
| 437 | 3 | 7 | 3 | 2 | 15 | 0.20 | 0.47 | 0.20 | 0.13 | N | 13 | 0.47 |
| 438 | 3 | 8 | 1 | 0 | 12 | 0.25 | 0.67 | 0.08 | 0.00 | T | 17 | 0.67 |
| 439 | 0 | 0 | 1 | 10 | 11 | 0.00 | 0.00 | 0.09 | 0.91 | C | 22 | 0.91 |
| 440 | 4 | 5 | 1 | 8 | 18 | 0.22 | 0.28 | 0.06 | 0.44 | C | 19 | 0.44 |
| 441 | 4 | 4 | 4 | 2 | 14 | 0.29 | 0.29 | 0.29 | 0.14 | N | 8 | 0.29 |
| 442 | 2 | 2 | 5 | 4 | 13 | 0.15 | 0.15 | 0.38 | 0.31 | N | 12 | 0.38 |
| 443 | 8 | 2 | 0 | 4 | 14 | 0.57 | 0.14 | 0.00 | 0.29 | A | 17 | 0.57 |
| 444 | 0 | 0 | 4 | 0 | 4 | 0.00 | 0.00 | 1.00 | 0.00 | G | 8 | 1.00 |
| 445 | 9 | 4 | 6 | 3 | 22 | 0.41 | 0.18 | 0.27 | 0.14 | N | 15 | 0.41 |
| 446 | 1 | 0 | 6 | 3 | 10 | 0.10 | 0.00 | 0.60 | 0.30 | G | 5 | 0.60 |
| 447 | 1 | 1 | 5 | 4 | 11 | 0.09 | 0.09 | 0.45 | 0.36 | G | 11 | 0.45 |
| 448 | 3 | 1 | 5 | 5 | 14 | 0.21 | 0.07 | 0.36 | 0.36 | C | 11 | 0.36 |
| 449 | 7 | 8 | 0 | 2 | 17 | 0.41 | 0.47 | 0.00 | 0.12 | T | 19 | 0.47 |
| 450 | 4 | 4 | 2 | 0 | 10 | 0.40 | 0.40 | 0.20 | 0.00 | A | 8 | 0.40 |
| 451 | 1 | 6 | 0 | 7 | 14 | 0.07 | 0.43 | 0.00 | 0.50 | C | 11 | 0.50 |
| 452 | 0 | 4 | 1 | 12 | 17 | 0.00 | 0.24 | 0.06 | 0.71 | C | 23 | 0.71 |
| 453 | 3 | 6 | 2 | 6 | 17 | 0.18 | 0.35 | 0.12 | 0.35 | N | 12 | 0.35 |
| 454 | 0 | 5 | 8 | 1 | 14 | 0.00 | 0.36 | 0.57 | 0.07 | G | 15 | 0.57 |
| 455 | 10 | 3 | 0 | 1 | 14 | 0.71 | 0.21 | 0.00 | 0.07 | A | 24 | 0.71 |
| 456 | 1 | 4 | 3 | 0 | 8 | 0.12 | 0.50 | 0.38 | 0.00 | T | 9 | 0.50 |
| 457 | 7 | 0 | 2 | 0 | 9 | 0.78 | 0.00 | 0.22 | 0.00 | A | 12 | 0.78 |
| 458 | 0 | 0 | 4 | 2 | 6 | 0.00 | 0.00 | 0.67 | 0.33 | G | 11 | 0.67 |
| 459 | 7 | 6 | 0 | 3 | 16 | 0.44 | 0.38 | 0.00 | 0.19 | A | 10 | 0.44 |
| 460 | 1 | 8 | 6 | 2 | 17 | 0.06 | 0.47 | 0.35 | 0.12 | T | 14 | 0.47 |
| 461 | 1 | 4 | 6 | 2 | 13 | 0.08 | 0.31 | 0.46 | 0.15 | G | 11 | 0.46 |
| 462 | 4 | 2 | 4 | 5 | 15 | 0.27 | 0.13 | 0.27 | 0.33 | N | 10 | 0.33 |
| 463 | 4 | 2 | 0 | 7 | 13 | 0.31 | 0.15 | 0.00 | 0.54 | C | 13 | 0.54 |
| 464 | 0 | 5 | 0 | 3 | 8 | 0.00 | 0.62 | 0.00 | 0.38 | T | 13 | 0.62 |
| 465 | 6 | 0 | 2 | 3 | 11 | 0.55 | 0.00 | 0.18 | 0.27 | A | 13 | 0.55 |
| 466 | 3 | 4 | 2 | 6 | 15 | 0.20 | 0.27 | 0.13 | 0.40 | N | 13 | 0.40 |
| 467 | 2 | 2 | 2 | 6 | 12 | 0.17 | 0.17 | 0.17 | 0.50 | N | 11 | 0.50 |
| 468 | 6 | 0 | 0 | 0 | 6 | 1.00 | 0.00 | 0.00 | 0.00 | A | 13 | 1.00 |
| 469 | 3 | 4 | 0 | 6 | 13 | 0.23 | 0.31 | 0.00 | 0.46 | C | 10 | 0.46 |
| 470 | 1 | 7 | 5 | 6 | 19 | 0.05 | 0.37 | 0.26 | 0.32 | T | 10 | 0.37 |
| 471 | 1 | 7 | 4 | 0 | 12 | 0.08 | 0.58 | 0.33 | 0.00 | T | 9 | 0.58 |
| 472 | 0 | 9 | 2 | 3 | 14 | 0.00 | 0.64 | 0.14 | 0.21 | T | 18 | 0.64 |
| 473 | 1 | 0 | 2 | 7 | 10 | 0.10 | 0.00 | 0.20 | 0.70 | C | 10 | 0.70 |
| 474 | 4 | 3 | 2 | 2 | 11 | 0.36 | 0.27 | 0.18 | 0.18 | N | 12 | 0.36 |
| 475 | 2 | 0 | 3 | 2 | 7 | 0.29 | 0.00 | 0.43 | 0.29 | G | 11 | 0.43 |
| 476 | 7 | 3 | 0 | 1 | 11 | 0.64 | 0.27 | 0.00 | 0.09 | A | 22 | 0.64 |
| 477 | 0 | 2 | 4 | 0 | 6 | 0.00 | 0.33 | 0.67 | 0.00 | G | 10 | 0.67 |
| 478 | 3 | 2 | 5 | 3 | 13 | 0.23 | 0.15 | 0.38 | 0.23 | N | 11 | 0.38 |
| 479 | 8 | 5 | 0 | 0 | 13 | 0.62 | 0.38 | 0.00 | 0.00 | A | 23 | 0.62 |
| 480 | 5 | 3 | 0 | 4 | 12 | 0.42 | 0.25 | 0.00 | 0.33 | A | 8 | 0.42 |
| 481 | 0 | 4 | 3 | 0 | 7 | 0.00 | 0.57 | 0.43 | 0.00 | T | 8 | 0.57 |
| 482 | 3 | 4 | 5 | 0 | 12 | 0.25 | 0.33 | 0.42 | 0.00 | G | 8 | 0.42 |
| 483 | 0 | 4 | 0 | 8 | 12 | 0.00 | 0.33 | 0.00 | 0.67 | C | 10 | 0.67 |
| 484 | 4 | 0 | 3 | 0 | 7 | 0.57 | 0.00 | 0.43 | 0.00 | A | 9 | 0.57 |
| 485 | 5 | 1 | 4 | 0 | 10 | 0.50 | 0.10 | 0.40 | 0.00 | A | 8 | 0.50 |
| 486 | 2 | 5 | 4 | 3 | 14 | 0.14 | 0.36 | 0.29 | 0.21 | N | 12 | 0.36 |
| 487 | 4 | 0 | 3 | 3 | 10 | 0.40 | 0.00 | 0.30 | 0.30 | A | 12 | 0.40 |
| 488 | 0 | 4 | 0 | 0 | 4 | 0.00 | 1.00 | 0.00 | 0.00 | T | 10 | 1.00 |
| 489 | 3 | 2 | 6 | 4 | 15 | 0.20 | 0.13 | 0.40 | 0.27 | N | 13 | 0.40 |
| 490 | 0 | 2 | 0 | 8 | 10 | 0.00 | 0.20 | 0.00 | 0.80 | C | 12 | 0.80 |
| 491 | 2 | 0 | 3 | 0 | 5 | 0.40 | 0.00 | 0.60 | 0.00 | G | 13 | 0.60 |
| 492 | 0 | 3 | 0 | 9 | 12 | 0.00 | 0.25 | 0.00 | 0.75 | C | 21 | 0.75 |
| 493 | 0 | 3 | 4 | 8 | 15 | 0.00 | 0.20 | 0.27 | 0.53 | C | 14 | 0.53 |
| 494 | 1 | 3 | 4 | 7 | 15 | 0.07 | 0.20 | 0.27 | 0.47 | C | 14 | 0.47 |
| 495 | 7 | 0 | 0 | 4 | 11 | 0.64 | 0.00 | 0.00 | 0.36 | A | 14 | 0.64 |
| 496 | 4 | 0 | 0 | 4 | 8 | 0.50 | 0.00 | 0.00 | 0.50 | A | 11 | 0.50 |
| 497 | 8 | 5 | 0 | 1 | 14 | 0.57 | 0.36 | 0.00 | 0.07 | A | 21 | 0.57 |
| 498 | 3 | 6 | 4 | 2 | 15 | 0.20 | 0.40 | 0.27 | 0.13 | N | 11 | 0.40 |
| 499 | 0 | 7 | 2 | 2 | 11 | 0.00 | 0.64 | 0.18 | 0.18 | T | 13 | 0.64 |
| 500 | 7 | 2 | 2 | 0 | 11 | 0.64 | 0.18 | 0.18 | 0.00 | A | 13 | 0.64 |
| 501 | 4 | 0 | 0 | 7 | 11 | 0.36 | 0.00 | 0.00 | 0.64 | C | 13 | 0.64 |
| 502 | 0 | 0 | 1 | 10 | 11 | 0.00 | 0.00 | 0.09 | 0.91 | C | 17 | 0.91 |
| 503 | 0 | 7 | 0 | 7 | 14 | 0.00 | 0.50 | 0.00 | 0.50 | C | 8 | 0.50 |
| 504 | 5 | 0 | 4 | 0 | 9 | 0.56 | 0.00 | 0.44 | 0.00 | A | 9 | 0.56 |
| 505 | 5 | 0 | 0 | 5 | 10 | 0.50 | 0.00 | 0.00 | 0.50 | A | 11 | 0.50 |
| 506 | 4 | 5 | 1 | 0 | 10 | 0.40 | 0.50 | 0.10 | 0.00 | T | 13 | 0.50 |
| 507 | 2 | 1 | 3 | 8 | 14 | 0.14 | 0.07 | 0.21 | 0.57 | C | 23 | 0.57 |
| 508 | 2 | 2 | 0 | 6 | 10 | 0.20 | 0.20 | 0.00 | 0.60 | C | 18 | 0.60 |
| 509 | 0 | 5 | 1 | 8 | 14 | 0.00 | 0.36 | 0.07 | 0.57 | C | 21 | 0.57 |
| 510 | 0 | 0 | 5 | 0 | 5 | 0.00 | 0.00 | 1.00 | 0.00 | G | 10 | 1.00 |
| 511 | 6 | 1 | 0 | 4 | 11 | 0.55 | 0.09 | 0.00 | 0.36 | A | 15 | 0.55 |
| 512 | 1 | 1 | 0 | 10 | 12 | 0.08 | 0.08 | 0.00 | 0.83 | C | 30 | 0.83 |
| 513 | 5 | 0 | 1 | 0 | 6 | 0.83 | 0.00 | 0.17 | 0.00 | A | 11 | 0.83 |
| 514 | 0 | 1 | 2 | 4 | 7 | 0.00 | 0.14 | 0.29 | 0.57 | C | 11 | 0.57 |
| 515 | 3 | 1 | 2 | 3 | 9 | 0.33 | 0.11 | 0.22 | 0.33 | N | 10 | 0.33 |
| 516 | 0 | 1 | 2 | 4 | 7 | 0.00 | 0.14 | 0.29 | 0.57 | C | 11 | 0.57 |
| 517 | 3 | 0 | 1 | 0 | 4 | 0.75 | 0.00 | 0.25 | 0.00 | A | 8 | 0.75 |
| 518 | 0 | 4 | 2 | 5 | 11 | 0.00 | 0.36 | 0.18 | 0.45 | C | 5 | 0.45 |
| 519 | 7 | 0 | 0 | 5 | 12 | 0.58 | 0.00 | 0.00 | 0.42 | A | 18 | 0.58 |
| 520 | 2 | 5 | 2 | 2 | 11 | 0.18 | 0.45 | 0.18 | 0.18 | N | 13 | 0.45 |
| 521 | 2 | 0 | 7 | 0 | 9 | 0.22 | 0.00 | 0.78 | 0.00 | G | 13 | 0.78 |
| 522 | 0 | 5 | 0 | 3 | 8 | 0.00 | 0.62 | 0.00 | 0.38 | T | 23 | 0.62 |
| 523 | 7 | 0 | 1 | 3 | 11 | 0.64 | 0.00 | 0.09 | 0.27 | A | 28 | 0.64 |
| 524 | 1 | 1 | 6 | 2 | 10 | 0.10 | 0.10 | 0.60 | 0.20 | G | 28 | 0.60 |
| 525 | 0 | 7 | 0 | 2 | 9 | 0.00 | 0.78 | 0.00 | 0.22 | T | 19 | 0.78 |
| 526 | 3 | 3 | 7 | 0 | 13 | 0.23 | 0.23 | 0.54 | 0.00 | G | 18 | 0.54 |
| 527 | 5 | 3 | 5 | 2 | 15 | 0.33 | 0.20 | 0.33 | 0.13 | N | 13 | 0.33 |
| 528 | 0 | 0 | 5 | 4 | 9 | 0.00 | 0.00 | 0.56 | 0.44 | G | 10 | 0.56 |
| 529 | 4 | 2 | 4 | 0 | 10 | 0.40 | 0.20 | 0.40 | 0.00 | A | 8 | 0.40 |
| 530 | 4 | 4 | 1 | 6 | 15 | 0.27 | 0.27 | 0.07 | 0.40 | C | 18 | 0.40 |
| 531 | 5 | 4 | 1 | 5 | 15 | 0.33 | 0.27 | 0.07 | 0.33 | A | 13 | 0.33 |
| 532 | 5 | 7 | 1 | 0 | 13 | 0.38 | 0.54 | 0.08 | 0.00 | T | 18 | 0.54 |
| 533 | 3 | 3 | 0 | 8 | 14 | 0.21 | 0.21 | 0.00 | 0.57 | C | 18 | 0.57 |
| 534 | 2 | 5 | 0 | 5 | 12 | 0.17 | 0.42 | 0.00 | 0.42 | C | 11 | 0.42 |
| 535 | 4 | 0 | 2 | 5 | 11 | 0.36 | 0.00 | 0.18 | 0.45 | C | 11 | 0.45 |
| 536 | 0 | 4 | 2 | 5 | 11 | 0.00 | 0.36 | 0.18 | 0.45 | C | 13 | 0.45 |
| 537 | 1 | 0 | 2 | 9 | 12 | 0.08 | 0.00 | 0.17 | 0.75 | C | 24 | 0.75 |
| 538 | 4 | 1 | 2 | 0 | 7 | 0.57 | 0.14 | 0.29 | 0.00 | A | 13 | 0.57 |
| 539 | 5 | 1 | 5 | 0 | 11 | 0.45 | 0.09 | 0.45 | 0.00 | A | 13 | 0.45 |
| 540 | 1 | 6 | 4 | 0 | 11 | 0.09 | 0.55 | 0.36 | 0.00 | T | 18 | 0.55 |
| 541 | 0 | 0 | 8 | 4 | 12 | 0.00 | 0.00 | 0.67 | 0.33 | G | 18 | 0.67 |
| 542 | 1 | 2 | 1 | 7 | 11 | 0.09 | 0.18 | 0.09 | 0.64 | C | 13 | 0.64 |
| 543 | 3 | 6 | 1 | 1 | 11 | 0.27 | 0.55 | 0.09 | 0.09 | T | 10 | 0.55 |
| 544 | 0 | 6 | 3 | 4 | 13 | 0.00 | 0.46 | 0.23 | 0.31 | T | 16 | 0.46 |
| 545 | 2 | 5 | 3 | 3 | 13 | 0.15 | 0.38 | 0.23 | 0.23 | N | 13 | 0.38 |
| 546 | 2 | 9 | 0 | 0 | 11 | 0.18 | 0.82 | 0.00 | 0.00 | T | 21 | 0.82 |
| 547 | 0 | 5 | 1 | 7 | 13 | 0.00 | 0.38 | 0.08 | 0.54 | C | 20 | 0.54 |
| 548 | 0 | 5 | 7 | 0 | 12 | 0.00 | 0.42 | 0.58 | 0.00 | G | 18 | 0.58 |
| 549 | 4 | 4 | 0 | 0 | 8 | 0.50 | 0.50 | 0.00 | 0.00 | A | 11 | 0.50 |
| 550 | 2 | 6 | 0 | 1 | 9 | 0.22 | 0.67 | 0.00 | 0.11 | T | 13 | 0.67 |
| 551 | 0 | 0 | 2 | 1 | 3 | 0.00 | 0.00 | 0.67 | 0.33 | G | 11 | 0.67 |
| 552 | 3 | 7 | 1 | 5 | 16 | 0.19 | 0.44 | 0.06 | 0.31 | T | 9 | 0.44 |
| 553 | 1 | 0 | 0 | 9 | 10 | 0.10 | 0.00 | 0.00 | 0.90 | C | 14 | 0.90 |
| 554 | 1 | 0 | 3 | 4 | 8 | 0.12 | 0.00 | 0.38 | 0.50 | C | 7 | 0.50 |
| 555 | 2 | 3 | 2 | 0 | 7 | 0.29 | 0.43 | 0.29 | 0.00 | T | 10 | 0.43 |
| 556 | 9 | 0 | 2 | 3 | 14 | 0.64 | 0.00 | 0.14 | 0.21 | A | 18 | 0.64 |
| 557 | 0 | 3 | 2 | 0 | 5 | 0.00 | 0.60 | 0.40 | 0.00 | T | 11 | 0.60 |
| 558 | 1 | 3 | 4 | 0 | 8 | 0.12 | 0.38 | 0.50 | 0.00 | G | 13 | 0.50 |
| 559 | 6 | 2 | 3 | 1 | 12 | 0.50 | 0.17 | 0.25 | 0.08 | A | 30 | 0.50 |
| 560 | 0 | 0 | 4 | 0 | 4 | 0.00 | 0.00 | 1.00 | 0.00 | G | 11 | 1.00 |
| 561 | 2 | 2 | 0 | 4 | 8 | 0.25 | 0.25 | 0.00 | 0.50 | C | 11 | 0.50 |
| 562 | 5 | 3 | 0 | 3 | 11 | 0.45 | 0.27 | 0.00 | 0.27 | A | 23 | 0.45 |
| 563 | 0 | 0 | 5 | 1 | 6 | 0.00 | 0.00 | 0.83 | 0.17 | G | 15 | 0.83 |
| 564 | 0 | 5 | 2 | 1 | 8 | 0.00 | 0.62 | 0.25 | 0.12 | T | 16 | 0.62 |
| 565 | 0 | 9 | 0 | 2 | 11 | 0.00 | 0.82 | 0.00 | 0.18 | T | 25 | 0.82 |
| 566 | 2 | 0 | 3 | 5 | 10 | 0.20 | 0.00 | 0.30 | 0.50 | C | 12 | 0.50 |
| 567 | 3 | 0 | 3 | 2 | 8 | 0.38 | 0.00 | 0.38 | 0.25 | A | 10 | 0.38 |
| 568 | 8 | 3 | 0 | 4 | 15 | 0.53 | 0.20 | 0.00 | 0.27 | A | 18 | 0.53 |
| 569 | 5 | 3 | 0 | 3 | 11 | 0.45 | 0.27 | 0.00 | 0.27 | A | 14 | 0.45 |
| 570 | 0 | 6 | 0 | 0 | 6 | 0.00 | 1.00 | 0.00 | 0.00 | T | 15 | 1.00 |
| 571 | 4 | 0 | 7 | 0 | 11 | 0.36 | 0.00 | 0.64 | 0.00 | G | 24 | 0.64 |
| 572 | 5 | 2 | 0 | 2 | 9 | 0.56 | 0.22 | 0.00 | 0.22 | A | 11 | 0.56 |
| 573 | 0 | 0 | 3 | 2 | 5 | 0.00 | 0.00 | 0.60 | 0.40 | G | 9 | 0.60 |
| 574 | 7 | 0 | 4 | 2 | 13 | 0.54 | 0.00 | 0.31 | 0.15 | A | 14 | 0.54 |
| 575 | 5 | 3 | 4 | 0 | 12 | 0.42 | 0.25 | 0.33 | 0.00 | A | 10 | 0.42 |
| 576 | 2 | 5 | 0 | 4 | 11 | 0.18 | 0.45 | 0.00 | 0.36 | T | 10 | 0.45 |
| 577 | 5 | 4 | 1 | 0 | 10 | 0.50 | 0.40 | 0.10 | 0.00 | A | 11 | 0.50 |
| 578 | 5 | 0 | 1 | 3 | 9 | 0.56 | 0.00 | 0.11 | 0.33 | A | 11 | 0.56 |
| 579 | 1 | 4 | 1 | 3 | 9 | 0.11 | 0.44 | 0.11 | 0.33 | N | 11 | 0.44 |
| 580 | 0 | 5 | 1 | 7 | 13 | 0.00 | 0.38 | 0.08 | 0.54 | C | 14 | 0.54 |
| 581 | 0 | 5 | 0 | 4 | 9 | 0.00 | 0.56 | 0.00 | 0.44 | T | 22 | 0.56 |
| 582 | 3 | 0 | 1 | 0 | 4 | 0.75 | 0.00 | 0.25 | 0.00 | A | 14 | 0.75 |
| 583 | 3 | 3 | 2 | 1 | 9 | 0.33 | 0.33 | 0.22 | 0.11 | N | 11 | 0.33 |
| 584 | 4 | 0 | 2 | 1 | 7 | 0.57 | 0.00 | 0.29 | 0.14 | A | 11 | 0.57 |
| 585 | 0 | 7 | 1 | 2 | 10 | 0.00 | 0.70 | 0.10 | 0.20 | T | 19 | 0.70 |
| 586 | 1 | 0 | 0 | 8 | 9 | 0.11 | 0.00 | 0.00 | 0.89 | C | 25 | 0.89 |
| 587 | 2 | 0 | 2 | 6 | 10 | 0.20 | 0.00 | 0.20 | 0.60 | C | 20 | 0.60 |
| 588 | 0 | 3 | 0 | 8 | 11 | 0.00 | 0.27 | 0.00 | 0.73 | C | 22 | 0.73 |
| 589 | 3 | 5 | 4 | 0 | 12 | 0.25 | 0.42 | 0.33 | 0.00 | T | 16 | 0.42 |
| 590 | 3 | 4 | 2 | 1 | 10 | 0.30 | 0.40 | 0.20 | 0.10 | N | 10 | 0.40 |
| 591 | 6 | 0 | 0 | 2 | 8 | 0.75 | 0.00 | 0.00 | 0.25 | A | 16 | 0.75 |
| 592 | 4 | 3 | 4 | 2 | 13 | 0.31 | 0.23 | 0.31 | 0.15 | N | 11 | 0.31 |
| 593 | 4 | 0 | 1 | 4 | 9 | 0.44 | 0.00 | 0.11 | 0.44 | A | 10 | 0.44 |
| 594 | 3 | 1 | 2 | 3 | 9 | 0.33 | 0.11 | 0.22 | 0.33 | N | 10 | 0.33 |
| 595 | 4 | 1 | 2 | 1 | 8 | 0.50 | 0.12 | 0.25 | 0.12 | N | 10 | 0.50 |
| 596 | 0 | 2 | 5 | 0 | 7 | 0.00 | 0.29 | 0.71 | 0.00 | G | 20 | 0.71 |
| 597 | 1 | 2 | 2 | 1 | 6 | 0.17 | 0.33 | 0.33 | 0.17 | N | 11 | 0.33 |
| 598 | 4 | 0 | 2 | 3 | 9 | 0.44 | 0.00 | 0.22 | 0.33 | A | 13 | 0.44 |
| 599 | 3 | 0 | 2 | 3 | 8 | 0.38 | 0.00 | 0.25 | 0.38 | A | 10 | 0.38 |
| 600 | 3 | 4 | 2 | 3 | 12 | 0.25 | 0.33 | 0.17 | 0.25 | N | 10 | 0.33 |
| 601 | 3 | 0 | 0 | 4 | 7 | 0.43 | 0.00 | 0.00 | 0.57 | C | 15 | 0.57 |
| 602 | 2 | 5 | 0 | 0 | 7 | 0.29 | 0.71 | 0.00 | 0.00 | T | 20 | 0.71 |
| 603 | 1 | 5 | 1 | 3 | 10 | 0.10 | 0.50 | 0.10 | 0.30 | T | 18 | 0.50 |
| 604 | 7 | 0 | 0 | 0 | 7 | 1.00 | 0.00 | 0.00 | 0.00 | A | 15 | 1.00 |
| 605 | 3 | 3 | 2 | 2 | 10 | 0.30 | 0.30 | 0.20 | 0.20 | N | 10 | 0.30 |
| 606 | 3 | 0 | 2 | 4 | 9 | 0.33 | 0.00 | 0.22 | 0.44 | C | 10 | 0.44 |
| 607 | 2 | 0 | 2 | 2 | 6 | 0.33 | 0.00 | 0.33 | 0.33 | A | 10 | 0.33 |
| 608 | 2 | 0 | 2 | 5 | 9 | 0.22 | 0.00 | 0.22 | 0.56 | C | 15 | 0.56 |
| 609 | 1 | 3 | 3 | 0 | 7 | 0.14 | 0.43 | 0.43 | 0.00 | G | 11 | 0.43 |
| 610 | 0 | 0 | 1 | 6 | 7 | 0.00 | 0.00 | 0.14 | 0.86 | C | 17 | 0.86 |
| 611 | 7 | 4 | 1 | 0 | 12 | 0.58 | 0.33 | 0.08 | 0.00 | A | 17 | 0.58 |
| 612 | 0 | 0 | 3 | 0 | 3 | 0.00 | 0.00 | 1.00 | 0.00 | G | 10 | 1.00 |
| 613 | 0 | 2 | 2 | 1 | 5 | 0.00 | 0.40 | 0.40 | 0.20 | G | 8 | 0.40 |
| 614 | 2 | 5 | 0 | 0 | 7 | 0.29 | 0.71 | 0.00 | 0.00 | T | 14 | 0.71 |
| 615 | 1 | 0 | 2 | 6 | 9 | 0.11 | 0.00 | 0.22 | 0.67 | C | 23 | 0.67 |
| 616 | 1 | 3 | 3 | 0 | 7 | 0.14 | 0.43 | 0.43 | 0.00 | G | 13 | 0.43 |
| 617 | 1 | 3 | 0 | 3 | 7 | 0.14 | 0.43 | 0.00 | 0.43 | C | 17 | 0.43 |
| 618 | 0 | 0 | 8 | 0 | 8 | 0.00 | 0.00 | 1.00 | 0.00 | G | 25 | 1.00 |
| 619 | 0 | 7 | 0 | 0 | 7 | 0.00 | 1.00 | 0.00 | 0.00 | T | 18 | 1.00 |
| 620 | 2 | 3 | 5 | 4 | 14 | 0.14 | 0.21 | 0.36 | 0.29 | N | 14 | 0.36 |
| 621 | 2 | 3 | 0 | 5 | 10 | 0.20 | 0.30 | 0.00 | 0.50 | C | 10 | 0.50 |
| 622 | 3 | 4 | 2 | 3 | 12 | 0.25 | 0.33 | 0.17 | 0.25 | N | 9 | 0.33 |
| 623 | 2 | 2 | 0 | 6 | 10 | 0.20 | 0.20 | 0.00 | 0.60 | C | 14 | 0.60 |
| 624 | 0 | 1 | 4 | 4 | 9 | 0.00 | 0.11 | 0.44 | 0.44 | C | 10 | 0.44 |
| 625 | 5 | 4 | 0 | 0 | 9 | 0.56 | 0.44 | 0.00 | 0.00 | A | 20 | 0.56 |
| 626 | 0 | 5 | 2 | 3 | 10 | 0.00 | 0.50 | 0.20 | 0.30 | T | 10 | 0.50 |
| 627 | 1 | 0 | 0 | 10 | 11 | 0.09 | 0.00 | 0.00 | 0.91 | C | 22 | 0.91 |
| 628 | 0 | 3 | 0 | 7 | 10 | 0.00 | 0.30 | 0.00 | 0.70 | C | 17 | 0.70 |
| 629 | 1 | 0 | 5 | 0 | 6 | 0.17 | 0.00 | 0.83 | 0.00 | G | 11 | 0.83 |
| 630 | 1 | 3 | 0 | 4 | 8 | 0.12 | 0.38 | 0.00 | 0.50 | C | 9 | 0.50 |
| 631 | 2 | 0 | 4 | 2 | 8 | 0.25 | 0.00 | 0.50 | 0.25 | G | 10 | 0.50 |
| 632 | 0 | 0 | 5 | 0 | 5 | 0.00 | 0.00 | 1.00 | 0.00 | G | 10 | 1.00 |
| 633 | 0 | 4 | 0 | 2 | 6 | 0.00 | 0.67 | 0.00 | 0.33 | T | 14 | 0.67 |
| 634 | 3 | 0 | 3 | 1 | 7 | 0.43 | 0.00 | 0.43 | 0.14 | A | 12 | 0.43 |
| 635 | 2 | 3 | 0 | 1 | 6 | 0.33 | 0.50 | 0.00 | 0.17 | T | 11 | 0.50 |
| 636 | 0 | 5 | 4 | 0 | 9 | 0.00 | 0.56 | 0.44 | 0.00 | T | 10 | 0.56 |
| 637 | 1 | 7 | 4 | 0 | 12 | 0.08 | 0.58 | 0.33 | 0.00 | T | 27 | 0.58 |
| 638 | 1 | 0 | 3 | 6 | 10 | 0.10 | 0.00 | 0.30 | 0.60 | C | 20 | 0.60 |
| 639 | 0 | 0 | 2 | 7 | 9 | 0.00 | 0.00 | 0.22 | 0.78 | C | 14 | 0.78 |
| 640 | 4 | 1 | 2 | 1 | 8 | 0.50 | 0.12 | 0.25 | 0.12 | N | 6 | 0.50 |
| 641 | 0 | 1 | 6 | 0 | 7 | 0.00 | 0.14 | 0.86 | 0.00 | G | 14 | 0.86 |
| 642 | 2 | 0 | 4 | 5 | 11 | 0.18 | 0.00 | 0.36 | 0.45 | C | 11 | 0.45 |
| 643 | 0 | 6 | 2 | 5 | 13 | 0.00 | 0.46 | 0.15 | 0.38 | T | 14 | 0.46 |
| 644 | 0 | 0 | 3 | 5 | 8 | 0.00 | 0.00 | 0.38 | 0.62 | C | 10 | 0.62 |
| 645 | 0 | 4 | 1 | 3 | 8 | 0.00 | 0.50 | 0.12 | 0.38 | T | 15 | 0.50 |
| 646 | 4 | 0 | 2 | 0 | 6 | 0.67 | 0.00 | 0.33 | 0.00 | A | 12 | 0.67 |
| 647 | 4 | 0 | 1 | 0 | 5 | 0.80 | 0.00 | 0.20 | 0.00 | A | 12 | 0.80 |
| 648 | 0 | 5 | 1 | 0 | 6 | 0.00 | 0.83 | 0.17 | 0.00 | T | 23 | 0.83 |
| 649 | 9 | 0 | 1 | 0 | 10 | 0.90 | 0.00 | 0.10 | 0.00 | A | 39 | 0.90 |
| 650 | 0 | 1 | 1 | 4 | 6 | 0.00 | 0.17 | 0.17 | 0.67 | C | 14 | 0.67 |
| 651 | 0 | 1 | 1 | 5 | 7 | 0.00 | 0.14 | 0.14 | 0.71 | C | 10 | 0.71 |
| 652 | 1 | 1 | 3 | 0 | 5 | 0.20 | 0.20 | 0.60 | 0.00 | G | 11 | 0.60 |
| 653 | 0 | 3 | 1 | 4 | 8 | 0.00 | 0.38 | 0.12 | 0.50 | C | 16 | 0.50 |
| 654 | 7 | 5 | 1 | 0 | 13 | 0.54 | 0.38 | 0.08 | 0.00 | A | 15 | 0.54 |
| 655 | 5 | 3 | 0 | 2 | 10 | 0.50 | 0.30 | 0.00 | 0.20 | A | 10 | 0.50 |
| 656 | 3 | 0 | 5 | 2 | 10 | 0.30 | 0.00 | 0.50 | 0.20 | G | 10 | 0.50 |
| 657 | 2 | 4 | 0 | 1 | 7 | 0.29 | 0.57 | 0.00 | 0.14 | T | 10 | 0.57 |
| 658 | 0 | 2 | 2 | 4 | 8 | 0.00 | 0.25 | 0.25 | 0.50 | C | 8 | 0.50 |
| 659 | 5 | 0 | 4 | 1 | 10 | 0.50 | 0.00 | 0.40 | 0.10 | A | 9 | 0.50 |
| 660 | 0 | 0 | 2 | 0 | 2 | 0.00 | 0.00 | 1.00 | 0.00 | G | 8 | 1.00 |
| 661 | 8 | 0 | 4 | 0 | 12 | 0.67 | 0.00 | 0.33 | 0.00 | A | 17 | 0.67 |
| 662 | 0 | 0 | 4 | 1 | 5 | 0.00 | 0.00 | 0.80 | 0.20 | G | 8 | 0.80 |
| 663 | 2 | 4 | 3 | 0 | 9 | 0.22 | 0.44 | 0.33 | 0.00 | T | 9 | 0.44 |
| 664 | 8 | 6 | 0 | 1 | 15 | 0.53 | 0.40 | 0.00 | 0.07 | A | 13 | 0.53 |
| 665 | 3 | 6 | 4 | 1 | 14 | 0.21 | 0.43 | 0.29 | 0.07 | T | 8 | 0.43 |
| 666 | 0 | 0 | 4 | 1 | 5 | 0.00 | 0.00 | 0.80 | 0.20 | G | 7 | 0.80 |
| 667 | 0 | 6 | 0 | 0 | 6 | 0.00 | 1.00 | 0.00 | 0.00 | T | 10 | 1.00 |
| 668 | 1 | 1 | 6 | 3 | 11 | 0.09 | 0.09 | 0.55 | 0.27 | G | 22 | 0.55 |
| 669 | 3 | 1 | 3 | 6 | 13 | 0.23 | 0.08 | 0.23 | 0.46 | C | 18 | 0.46 |
| 670 | 2 | 3 | 0 | 3 | 8 | 0.25 | 0.38 | 0.00 | 0.38 | C | 11 | 0.38 |
| 671 | 2 | 0 | 4 | 3 | 9 | 0.22 | 0.00 | 0.44 | 0.33 | G | 14 | 0.44 |
| 672 | 4 | 5 | 0 | 0 | 9 | 0.44 | 0.56 | 0.00 | 0.00 | T | 14 | 0.56 |
| 673 | 0 | 4 | 2 | 5 | 11 | 0.00 | 0.36 | 0.18 | 0.45 | C | 14 | 0.45 |
| 674 | 5 | 2 | 0 | 0 | 7 | 0.71 | 0.29 | 0.00 | 0.00 | A | 10 | 0.71 |
| 675 | 0 | 2 | 4 | 1 | 7 | 0.00 | 0.29 | 0.57 | 0.14 | G | 10 | 0.57 |
| 676 | 3 | 1 | 0 | 1 | 5 | 0.60 | 0.20 | 0.00 | 0.20 | A | 9 | 0.60 |
| 677 | 4 | 3 | 0 | 0 | 7 | 0.57 | 0.43 | 0.00 | 0.00 | A | 10 | 0.57 |
| 678 | 3 | 0 | 2 | 2 | 7 | 0.43 | 0.00 | 0.29 | 0.29 | A | 9 | 0.43 |
| 679 | 3 | 0 | 0 | 6 | 9 | 0.33 | 0.00 | 0.00 | 0.67 | C | 27 | 0.67 |
| 680 | 1 | 5 | 1 | 0 | 7 | 0.14 | 0.71 | 0.14 | 0.00 | T | 24 | 0.71 |
| 681 | 3 | 0 | 1 | 5 | 9 | 0.33 | 0.00 | 0.11 | 0.56 | C | 15 | 0.56 |
| 682 | 2 | 1 | 1 | 5 | 9 | 0.22 | 0.11 | 0.11 | 0.56 | C | 13 | 0.56 |
| 683 | 0 | 3 | 1 | 2 | 6 | 0.00 | 0.50 | 0.17 | 0.33 | T | 9 | 0.50 |
| 684 | 6 | 5 | 0 | 1 | 12 | 0.50 | 0.42 | 0.00 | 0.08 | A | 12 | 0.50 |
| 685 | 0 | 0 | 4 | 1 | 5 | 0.00 | 0.00 | 0.80 | 0.20 | G | 12 | 0.80 |
| 686 | 0 | 4 | 0 | 2 | 6 | 0.00 | 0.67 | 0.00 | 0.33 | T | 16 | 0.67 |
| 687 | 2 | 4 | 2 | 1 | 9 | 0.22 | 0.44 | 0.22 | 0.11 | N | 17 | 0.44 |
| 688 | 2 | 0 | 6 | 0 | 8 | 0.25 | 0.00 | 0.75 | 0.00 | G | 30 | 0.75 |
| 689 | 0 | 0 | 6 | 0 | 6 | 0.00 | 0.00 | 1.00 | 0.00 | G | 20 | 1.00 |
| 690 | 4 | 0 | 5 | 2 | 11 | 0.36 | 0.00 | 0.45 | 0.18 | G | 12 | 0.45 |
| 691 | 2 | 3 | 2 | 0 | 7 | 0.29 | 0.43 | 0.29 | 0.00 | T | 12 | 0.43 |
| 692 | 3 | 0 | 3 | 5 | 11 | 0.27 | 0.00 | 0.27 | 0.45 | C | 18 | 0.45 |
| 693 | 2 | 4 | 2 | 3 | 11 | 0.18 | 0.36 | 0.18 | 0.27 | N | 18 | 0.36 |
| 694 | 1 | 4 | 1 | 2 | 8 | 0.12 | 0.50 | 0.12 | 0.25 | N | 11 | 0.50 |
| 695 | 1 | 3 | 6 | 2 | 12 | 0.08 | 0.25 | 0.50 | 0.17 | G | 17 | 0.50 |
| 696 | 4 | 3 | 0 | 0 | 7 | 0.57 | 0.43 | 0.00 | 0.00 | A | 15 | 0.57 |
| 697 | 0 | 0 | 0 | 1 | 1 | 0.00 | 0.00 | 0.00 | 1.00 | C | 10 | 1.00 |
| 698 | 2 | 1 | 5 | 1 | 9 | 0.22 | 0.11 | 0.56 | 0.11 | G | 13 | 0.56 |
| 699 | 1 | 3 | 5 | 0 | 9 | 0.11 | 0.33 | 0.56 | 0.00 | G | 9 | 0.56 |
| 700 | 1 | 0 | 2 | 6 | 9 | 0.11 | 0.00 | 0.22 | 0.67 | C | 13 | 0.67 |
| 701 | 1 | 0 | 2 | 0 | 3 | 0.33 | 0.00 | 0.67 | 0.00 | G | 9 | 0.67 |
| 702 | 2 | 4 | 0 | 6 | 12 | 0.17 | 0.33 | 0.00 | 0.50 | C | 15 | 0.50 |
| 703 | 0 | 0 | 2 | 6 | 8 | 0.00 | 0.00 | 0.25 | 0.75 | C | 12 | 0.75 |
| 704 | 0 | 0 | 1 | 6 | 7 | 0.00 | 0.00 | 0.14 | 0.86 | C | 13 | 0.86 |
| 705 | 1 | 7 | 0 | 1 | 9 | 0.11 | 0.78 | 0.00 | 0.11 | T | 12 | 0.78 |
| 706 | 0 | 0 | 7 | 3 | 10 | 0.00 | 0.00 | 0.70 | 0.30 | G | 16 | 0.70 |
| 707 | 0 | 5 | 0 | 0 | 5 | 0.00 | 1.00 | 0.00 | 0.00 | T | 28 | 1.00 |
| 708 | 0 | 0 | 7 | 1 | 8 | 0.00 | 0.00 | 0.88 | 0.12 | G | 30 | 0.88 |
| 709 | 1 | 2 | 1 | 3 | 7 | 0.14 | 0.29 | 0.14 | 0.43 | N | 9 | 0.43 |
| 710 | 1 | 6 | 1 | 2 | 10 | 0.10 | 0.60 | 0.10 | 0.20 | T | 24 | 0.60 |
| 711 | 1 | 4 | 0 | 2 | 7 | 0.14 | 0.57 | 0.00 | 0.29 | T | 15 | 0.57 |
| 712 | 1 | 0 | 5 | 0 | 6 | 0.17 | 0.00 | 0.83 | 0.00 | G | 18 | 0.83 |
| 713 | 2 | 1 | 5 | 2 | 10 | 0.20 | 0.10 | 0.50 | 0.20 | G | 21 | 0.50 |
| 714 | 2 | 1 | 4 | 0 | 7 | 0.29 | 0.14 | 0.57 | 0.00 | G | 10 | 0.57 |
| 715 | 1 | 6 | 1 | 0 | 8 | 0.12 | 0.75 | 0.12 | 0.00 | T | 17 | 0.75 |
| 716 | 1 | 0 | 1 | 6 | 8 | 0.12 | 0.00 | 0.12 | 0.75 | C | 13 | 0.75 |
| 717 | 1 | 1 | 0 | 7 | 9 | 0.11 | 0.11 | 0.00 | 0.78 | C | 17 | 0.78 |
| 718 | 1 | 0 | 4 | 0 | 5 | 0.20 | 0.00 | 0.80 | 0.00 | G | 9 | 0.80 |
| 719 | 2 | 1 | 2 | 3 | 8 | 0.25 | 0.12 | 0.25 | 0.38 | N | 10 | 0.38 |
| 720 | 1 | 0 | 2 | 5 | 8 | 0.12 | 0.00 | 0.25 | 0.62 | C | 20 | 0.62 |
| 721 | 1 | 0 | 3 | 2 | 6 | 0.17 | 0.00 | 0.50 | 0.33 | G | 7 | 0.50 |
| 722 | 7 | 3 | 2 | 0 | 12 | 0.58 | 0.25 | 0.17 | 0.00 | A | 7 | 0.58 |
| 723 | 6 | 2 | 2 | 2 | 12 | 0.50 | 0.17 | 0.17 | 0.17 | N | 7 | 0.50 |
| 724 | 0 | 5 | 0 | 0 | 5 | 0.00 | 1.00 | 0.00 | 0.00 | T | 9 | 1.00 |
| 725 | 0 | 0 | 4 | 6 | 10 | 0.00 | 0.00 | 0.40 | 0.60 | C | 10 | 0.60 |
| 726 | 3 | 0 | 2 | 0 | 5 | 0.60 | 0.00 | 0.40 | 0.00 | A | 8 | 0.60 |
| 727 | 4 | 3 | 1 | 0 | 8 | 0.50 | 0.38 | 0.12 | 0.00 | A | 8 | 0.50 |
| 728 | 4 | 2 | 4 | 0 | 10 | 0.40 | 0.20 | 0.40 | 0.00 | A | 9 | 0.40 |
| 729 | 5 | 0 | 3 | 0 | 8 | 0.62 | 0.00 | 0.38 | 0.00 | A | 13 | 0.62 |
| 730 | 0 | 0 | 3 | 0 | 3 | 0.00 | 0.00 | 1.00 | 0.00 | G | 8 | 1.00 |
| 731 | 1 | 3 | 3 | 2 | 9 | 0.11 | 0.33 | 0.33 | 0.22 | N | 7 | 0.33 |
| 732 | 4 | 3 | 5 | 1 | 13 | 0.31 | 0.23 | 0.38 | 0.08 | G | 9 | 0.38 |
| 733 | 0 | 0 | 5 | 6 | 11 | 0.00 | 0.00 | 0.45 | 0.55 | C | 14 | 0.55 |
| 734 | 1 | 6 | 0 | 0 | 7 | 0.14 | 0.86 | 0.00 | 0.00 | T | 14 | 0.86 |
| 735 | 0 | 0 | 0 | 9 | 9 | 0.00 | 0.00 | 0.00 | 1.00 | C | 25 | 1.00 |
| 736 | 0 | 0 | 3 | 0 | 3 | 0.00 | 0.00 | 1.00 | 0.00 | G | 8 | 1.00 |
| 737 | 1 | 6 | 2 | 0 | 9 | 0.11 | 0.67 | 0.22 | 0.00 | T | 26 | 0.67 |
| 738 | 0 | 0 | 2 | 6 | 8 | 0.00 | 0.00 | 0.25 | 0.75 | C | 27 | 0.75 |
| 739 | 2 | 0 | 4 | 0 | 6 | 0.33 | 0.00 | 0.67 | 0.00 | G | 13 | 0.67 |
| 740 | 0 | 1 | 3 | 3 | 7 | 0.00 | 0.14 | 0.43 | 0.43 | C | 9 | 0.43 |
| 741 | 2 | 1 | 5 | 0 | 8 | 0.25 | 0.12 | 0.62 | 0.00 | G | 8 | 0.62 |
| 742 | 2 | 1 | 4 | 2 | 9 | 0.22 | 0.11 | 0.44 | 0.22 | N | 16 | 0.44 |
| 743 | 3 | 2 | 2 | 0 | 7 | 0.43 | 0.29 | 0.29 | 0.00 | A | 5 | 0.43 |
| 744 | 1 | 0 | 0 | 0 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | A | 19 | 1.00 |
| 745 | 0 | 0 | 2 | 7 | 9 | 0.00 | 0.00 | 0.22 | 0.78 | C | 26 | 0.78 |
| 746 | 2 | 4 | 2 | 0 | 8 | 0.25 | 0.50 | 0.25 | 0.00 | T | 12 | 0.50 |
| 747 | 3 | 0 | 1 | 6 | 10 | 0.30 | 0.00 | 0.10 | 0.60 | C | 18 | 0.60 |
| 748 | 3 | 4 | 3 | 0 | 10 | 0.30 | 0.40 | 0.30 | 0.00 | T | 10 | 0.40 |
| 749 | 3 | 4 | 1 | 4 | 12 | 0.25 | 0.33 | 0.08 | 0.33 | N | 9 | 0.33 |
| 750 | 0 | 2 | 2 | 7 | 11 | 0.00 | 0.18 | 0.18 | 0.64 | C | 13 | 0.64 |
| 751 | 0 | 2 | 2 | 0 | 4 | 0.00 | 0.50 | 0.50 | 0.00 | G | 16 | 0.50 |
| 752 | 0 | 4 | 1 | 8 | 13 | 0.00 | 0.31 | 0.08 | 0.62 | C | 17 | 0.62 |
| 753 | 4 | 0 | 3 | 0 | 7 | 0.57 | 0.00 | 0.43 | 0.00 | A | 15 | 0.57 |
| 754 | 0 | 0 | 0 | 7 | 7 | 0.00 | 0.00 | 0.00 | 1.00 | C | 24 | 1.00 |
| 755 | 0 | 3 | 0 | 0 | 3 | 0.00 | 1.00 | 0.00 | 0.00 | T | 15 | 1.00 |
| 756 | 2 | 0 | 0 | 0 | 2 | 1.00 | 0.00 | 0.00 | 0.00 | A | 7 | 1.00 |
| 757 | 0 | 3 | 4 | 0 | 7 | 0.00 | 0.43 | 0.57 | 0.00 | G | 14 | 0.57 |
| 758 | 5 | 0 | 4 | 2 | 11 | 0.45 | 0.00 | 0.36 | 0.18 | A | 17 | 0.45 |
| 759 | 0 | 4 | 1 | 2 | 7 | 0.00 | 0.57 | 0.14 | 0.29 | T | 15 | 0.57 |
| 760 | 3 | 0 | 2 | 6 | 11 | 0.27 | 0.00 | 0.18 | 0.55 | C | 19 | 0.55 |
| 761 | 1 | 3 | 2 | 0 | 6 | 0.17 | 0.50 | 0.33 | 0.00 | T | 10 | 0.50 |
| 762 | 1 | 3 | 0 | 0 | 4 | 0.25 | 0.75 | 0.00 | 0.00 | T | 13 | 0.75 |
| 763 | 1 | 0 | 2 | 5 | 8 | 0.12 | 0.00 | 0.25 | 0.62 | C | 18 | 0.62 |
| 764 | 0 | 0 | 4 | 2 | 6 | 0.00 | 0.00 | 0.67 | 0.33 | G | 10 | 0.67 |
| 765 | 4 | 0 | 0 | 0 | 4 | 1.00 | 0.00 | 0.00 | 0.00 | A | 14 | 1.00 |
| 766 | 3 | 2 | 4 | 2 | 11 | 0.27 | 0.18 | 0.36 | 0.18 | N | 13 | 0.36 |
| 767 | 6 | 0 | 1 | 0 | 7 | 0.86 | 0.00 | 0.14 | 0.00 | A | 12 | 0.86 |
| 768 | 0 | 0 | 0 | 5 | 5 | 0.00 | 0.00 | 0.00 | 1.00 | C | 13 | 1.00 |
| 769 | 2 | 7 | 0 | 1 | 10 | 0.20 | 0.70 | 0.00 | 0.10 | T | 25 | 0.70 |
| 770 | 4 | 3 | 5 | 2 | 14 | 0.29 | 0.21 | 0.36 | 0.14 | N | 15 | 0.36 |
| 771 | 3 | 3 | 0 | 4 | 10 | 0.30 | 0.30 | 0.00 | 0.40 | C | 10 | 0.40 |
| 772 | 3 | 3 | 3 | 1 | 10 | 0.30 | 0.30 | 0.30 | 0.10 | N | 13 | 0.30 |
| 773 | 3 | 0 | 2 | 5 | 10 | 0.30 | 0.00 | 0.20 | 0.50 | C | 12 | 0.50 |
| 774 | 0 | 6 | 2 | 0 | 8 | 0.00 | 0.75 | 0.25 | 0.00 | T | 15 | 0.75 |
| 775 | 0 | 5 | 2 | 4 | 11 | 0.00 | 0.45 | 0.18 | 0.36 | T | 7 | 0.45 |
| 776 | 3 | 0 | 3 | 3 | 9 | 0.33 | 0.00 | 0.33 | 0.33 | A | 7 | 0.33 |
| 777 | 4 | 0 | 1 | 3 | 8 | 0.50 | 0.00 | 0.12 | 0.38 | A | 7 | 0.50 |
| 778 | 2 | 3 | 1 | 2 | 8 | 0.25 | 0.38 | 0.12 | 0.25 | N | 7 | 0.38 |
| 779 | 0 | 3 | 1 | 5 | 9 | 0.00 | 0.33 | 0.11 | 0.56 | C | 13 | 0.56 |
| 780 | 0 | 5 | 0 | 4 | 9 | 0.00 | 0.56 | 0.00 | 0.44 | T | 9 | 0.56 |
| 781 | 2 | 0 | 5 | 1 | 8 | 0.25 | 0.00 | 0.62 | 0.12 | G | 16 | 0.62 |
| 782 | 1 | 0 | 4 | 1 | 6 | 0.17 | 0.00 | 0.67 | 0.17 | G | 7 | 0.67 |
| 783 | 1 | 4 | 0 | 1 | 6 | 0.17 | 0.67 | 0.00 | 0.17 | T | 14 | 0.67 |
| 784 | 1 | 0 | 7 | 0 | 8 | 0.12 | 0.00 | 0.88 | 0.00 | G | 30 | 0.88 |
| 785 | 0 | 2 | 4 | 0 | 6 | 0.00 | 0.33 | 0.67 | 0.00 | G | 7 | 0.67 |
| 786 | 3 | 3 | 2 | 0 | 8 | 0.38 | 0.38 | 0.25 | 0.00 | A | 9 | 0.38 |
| 787 | 4 | 2 | 3 | 3 | 12 | 0.33 | 0.17 | 0.25 | 0.25 | N | 14 | 0.33 |
| 788 | 0 | 2 | 3 | 4 | 9 | 0.00 | 0.22 | 0.33 | 0.44 | C | 17 | 0.44 |
| 789 | 2 | 0 | 3 | 1 | 6 | 0.33 | 0.00 | 0.50 | 0.17 | G | 8 | 0.50 |
| 790 | 2 | 0 | 0 | 0 | 2 | 1.00 | 0.00 | 0.00 | 0.00 | A | 6 | 1.00 |
| 791 | 2 | 5 | 2 | 2 | 11 | 0.18 | 0.45 | 0.18 | 0.18 | N | 14 | 0.45 |
| 792 | 3 | 0 | 4 | 1 | 8 | 0.38 | 0.00 | 0.50 | 0.12 | G | 9 | 0.50 |
| 793 | 0 | 1 | 3 | 1 | 5 | 0.00 | 0.20 | 0.60 | 0.20 | G | 9 | 0.60 |
| 794 | 1 | 1 | 1 | 5 | 8 | 0.12 | 0.12 | 0.12 | 0.62 | C | 12 | 0.62 |
| 795 | 1 | 2 | 1 | 5 | 9 | 0.11 | 0.22 | 0.11 | 0.56 | C | 9 | 0.56 |
| 796 | 1 | 2 | 1 | 0 | 4 | 0.25 | 0.50 | 0.25 | 0.00 | T | 4 | 0.50 |
| 797 | 2 | 5 | 0 | 4 | 11 | 0.18 | 0.45 | 0.00 | 0.36 | T | 6 | 0.45 |
| 798 | 2 | 0 | 0 | 0 | 2 | 1.00 | 0.00 | 0.00 | 0.00 | A | 9 | 1.00 |
| 799 | 4 | 1 | 0 | 0 | 5 | 0.80 | 0.20 | 0.00 | 0.00 | A | 11 | 0.80 |
| 800 | 0 | 0 | 3 | 0 | 3 | 0.00 | 0.00 | 1.00 | 0.00 | G | 6 | 1.00 |
| 801 | 2 | 0 | 2 | 1 | 5 | 0.40 | 0.00 | 0.40 | 0.20 | A | 6 | 0.40 |
| 802 | 1 | 4 | 0 | 4 | 9 | 0.11 | 0.44 | 0.00 | 0.44 | C | 10 | 0.44 |
| 803 | 0 | 4 | 0 | 4 | 8 | 0.00 | 0.50 | 0.00 | 0.50 | C | 13 | 0.50 |
| 804 | 1 | 0 | 4 | 0 | 5 | 0.20 | 0.00 | 0.80 | 0.00 | G | 13 | 0.80 |
| 805 | 1 | 2 | 0 | 3 | 6 | 0.17 | 0.33 | 0.00 | 0.50 | C | 10 | 0.50 |
| 806 | 0 | 2 | 0 | 4 | 6 | 0.00 | 0.33 | 0.00 | 0.67 | C | 6 | 0.67 |
| 807 | 1 | 0 | 1 | 5 | 7 | 0.14 | 0.00 | 0.14 | 0.71 | C | 18 | 0.71 |
| 808 | 0 | 0 | 3 | 0 | 3 | 0.00 | 0.00 | 1.00 | 0.00 | G | 9 | 1.00 |
| 809 | 2 | 0 | 0 | 5 | 7 | 0.29 | 0.00 | 0.00 | 0.71 | C | 12 | 0.71 |
| 810 | 2 | 5 | 0 | 4 | 11 | 0.18 | 0.45 | 0.00 | 0.36 | T | 16 | 0.45 |
| 811 | 0 | 2 | 3 | 1 | 6 | 0.00 | 0.33 | 0.50 | 0.17 | G | 12 | 0.50 |
| 812 | 0 | 2 | 0 | 4 | 6 | 0.00 | 0.33 | 0.00 | 0.67 | C | 17 | 0.67 |
| 813 | 0 | 1 | 3 | 0 | 4 | 0.00 | 0.25 | 0.75 | 0.00 | G | 11 | 0.75 |
| 814 | 2 | 4 | 3 | 2 | 11 | 0.18 | 0.36 | 0.27 | 0.18 | N | 14 | 0.36 |
| 815 | 2 | 0 | 5 | 0 | 7 | 0.29 | 0.00 | 0.71 | 0.00 | G | 9 | 0.71 |
| 816 | 3 | 6 | 2 | 1 | 12 | 0.25 | 0.50 | 0.17 | 0.08 | T | 19 | 0.50 |
| 817 | 0 | 6 | 1 | 3 | 10 | 0.00 | 0.60 | 0.10 | 0.30 | T | 17 | 0.60 |
| 818 | 2 | 0 | 1 | 0 | 3 | 0.67 | 0.00 | 0.33 | 0.00 | A | 7 | 0.67 |
| 819 | 6 | 1 | 0 | 0 | 7 | 0.86 | 0.14 | 0.00 | 0.00 | A | 30 | 0.86 |
| 820 | 0 | 2 | 0 | 6 | 8 | 0.00 | 0.25 | 0.00 | 0.75 | C | 29 | 0.75 |
| 821 | 0 | 2 | 2 | 3 | 7 | 0.00 | 0.29 | 0.29 | 0.43 | C | 7 | 0.43 |
| 822 | 2 | 3 | 1 | 6 | 12 | 0.17 | 0.25 | 0.08 | 0.50 | C | 16 | 0.50 |
| 823 | 3 | 4 | 1 | 0 | 8 | 0.38 | 0.50 | 0.12 | 0.00 | T | 12 | 0.50 |
| 824 | 3 | 0 | 4 | 0 | 7 | 0.43 | 0.00 | 0.57 | 0.00 | G | 13 | 0.57 |
| 825 | 0 | 0 | 0 | 6 | 6 | 0.00 | 0.00 | 0.00 | 1.00 | C | 18 | 1.00 |
| 826 | 2 | 1 | 2 | 0 | 5 | 0.40 | 0.20 | 0.40 | 0.00 | A | 9 | 0.40 |
| 827 | 2 | 0 | 4 | 2 | 8 | 0.25 | 0.00 | 0.50 | 0.25 | G | 9 | 0.50 |
| 828 | 3 | 0 | 3 | 2 | 8 | 0.38 | 0.00 | 0.38 | 0.25 | A | 6 | 0.38 |
| 829 | 1 | 4 | 0 | 1 | 6 | 0.17 | 0.67 | 0.00 | 0.17 | T | 12 | 0.67 |
| 830 | 1 | 5 | 4 | 1 | 11 | 0.09 | 0.45 | 0.36 | 0.09 | T | 14 | 0.45 |
| 831 | 2 | 5 | 0 | 4 | 11 | 0.18 | 0.45 | 0.00 | 0.36 | T | 24 | 0.45 |
| 832 | 4 | 2 | 2 | 4 | 12 | 0.33 | 0.17 | 0.17 | 0.33 | N | 17 | 0.33 |
| 833 | 4 | 3 | 4 | 0 | 11 | 0.36 | 0.27 | 0.36 | 0.00 | A | 11 | 0.36 |
| 834 | 0 | 0 | 4 | 0 | 4 | 0.00 | 0.00 | 1.00 | 0.00 | G | 9 | 1.00 |
| 835 | 0 | 7 | 0 | 3 | 10 | 0.00 | 0.70 | 0.00 | 0.30 | T | 22 | 0.70 |
| 836 | 0 | 0 | 0 | 4 | 4 | 0.00 | 0.00 | 0.00 | 1.00 | C | 14 | 1.00 |
| 837 | 1 | 4 | 3 | 0 | 8 | 0.12 | 0.50 | 0.38 | 0.00 | T | 13 | 0.50 |
| 838 | 0 | 0 | 2 | 0 | 2 | 0.00 | 0.00 | 1.00 | 0.00 | G | 7 | 1.00 |
| 839 | 2 | 4 | 2 | 4 | 12 | 0.17 | 0.33 | 0.17 | 0.33 | N | 9 | 0.33 |
| 840 | 3 | 0 | 1 | 2 | 6 | 0.50 | 0.00 | 0.17 | 0.33 | A | 6 | 0.50 |
| 841 | 0 | 2 | 0 | 3 | 5 | 0.00 | 0.40 | 0.00 | 0.60 | C | 7 | 0.60 |
| 842 | 4 | 3 | 0 | 3 | 10 | 0.40 | 0.30 | 0.00 | 0.30 | A | 14 | 0.40 |
| 843 | 3 | 3 | 1 | 0 | 7 | 0.43 | 0.43 | 0.14 | 0.00 | A | 6 | 0.43 |
| 844 | 2 | 3 | 1 | 6 | 12 | 0.17 | 0.25 | 0.08 | 0.50 | C | 14 | 0.50 |
| 845 | 4 | 5 | 1 | 3 | 13 | 0.31 | 0.38 | 0.08 | 0.23 | T | 17 | 0.38 |
| 846 | 4 | 0 | 3 | 4 | 11 | 0.36 | 0.00 | 0.27 | 0.36 | A | 14 | 0.36 |
| 847 | 3 | 0 | 2 | 4 | 9 | 0.33 | 0.00 | 0.22 | 0.44 | C | 17 | 0.44 |
| 848 | 0 | 4 | 2 | 0 | 6 | 0.00 | 0.67 | 0.33 | 0.00 | T | 11 | 0.67 |
| 849 | 1 | 4 | 0 | 3 | 8 | 0.12 | 0.50 | 0.00 | 0.38 | T | 9 | 0.50 |
| 850 | 0 | 5 | 1 | 3 | 9 | 0.00 | 0.56 | 0.11 | 0.33 | T | 12 | 0.56 |
| 851 | 0 | 7 | 0 | 1 | 8 | 0.00 | 0.88 | 0.00 | 0.12 | T | 14 | 0.88 |
| 852 | 7 | 4 | 1 | 0 | 12 | 0.58 | 0.33 | 0.08 | 0.00 | A | 12 | 0.58 |
| 853 | 3 | 1 | 2 | 2 | 8 | 0.38 | 0.12 | 0.25 | 0.25 | N | 9 | 0.38 |
| 854 | 1 | 0 | 1 | 7 | 9 | 0.11 | 0.00 | 0.11 | 0.78 | C | 6 | 0.78 |
| 855 | 1 | 1 | 2 | 4 | 8 | 0.12 | 0.12 | 0.25 | 0.50 | N | 6 | 0.50 |
| 856 | 1 | 5 | 1 | 4 | 11 | 0.09 | 0.45 | 0.09 | 0.36 | T | 16 | 0.45 |
| 857 | 0 | 0 | 3 | 5 | 8 | 0.00 | 0.00 | 0.38 | 0.62 | C | 16 | 0.62 |
| 858 | 0 | 0 | 2 | 0 | 2 | 0.00 | 0.00 | 1.00 | 0.00 | G | 6 | 1.00 |
| 859 | 1 | 1 | 0 | 5 | 7 | 0.14 | 0.14 | 0.00 | 0.71 | C | 11 | 0.71 |
| 860 | 2 | 1 | 1 | 5 | 9 | 0.22 | 0.11 | 0.11 | 0.56 | C | 10 | 0.56 |
| 861 | 0 | 0 | 2 | 0 | 2 | 0.00 | 0.00 | 1.00 | 0.00 | G | 10 | 1.00 |
| 862 | 7 | 0 | 2 | 2 | 11 | 0.64 | 0.00 | 0.18 | 0.18 | A | 31 | 0.64 |
| 863 | 0 | 2 | 1 | 0 | 3 | 0.00 | 0.67 | 0.33 | 0.00 | T | 6 | 0.67 |
| 864 | 2 | 2 | 0 | 4 | 8 | 0.25 | 0.25 | 0.00 | 0.50 | C | 12 | 0.50 |
| 865 | 0 | 1 | 2 | 4 | 7 | 0.00 | 0.14 | 0.29 | 0.57 | C | 7 | 0.57 |
| 866 | 1 | 0 | 0 | 3 | 4 | 0.25 | 0.00 | 0.00 | 0.75 | C | 12 | 0.75 |
| 867 | 1 | 0 | 4 | 0 | 5 | 0.20 | 0.00 | 0.80 | 0.00 | G | 16 | 0.80 |
| 868 | 1 | 1 | 0 | 4 | 6 | 0.17 | 0.17 | 0.00 | 0.67 | C | 12 | 0.67 |
| 869 | 2 | 3 | 2 | 6 | 13 | 0.15 | 0.23 | 0.15 | 0.46 | N | 18 | 0.46 |
| 870 | 1 | 3 | 3 | 0 | 7 | 0.14 | 0.43 | 0.43 | 0.00 | G | 13 | 0.43 |
| 871 | 1 | 4 | 0 | 0 | 5 | 0.20 | 0.80 | 0.00 | 0.00 | T | 11 | 0.80 |
| 872 | 0 | 0 | 1 | 0 | 1 | 0.00 | 0.00 | 1.00 | 0.00 | G | 19 | 1.00 |
| 873 | 0 | 2 | 1 | 7 | 10 | 0.00 | 0.20 | 0.10 | 0.70 | C | 27 | 0.70 |
| 874 | 0 | 1 | 1 | 5 | 7 | 0.00 | 0.14 | 0.14 | 0.71 | C | 21 | 0.71 |
| 875 | 0 | 0 | 3 | 2 | 5 | 0.00 | 0.00 | 0.60 | 0.40 | G | 8 | 0.60 |
| 876 | 4 | 0 | 0 | 1 | 5 | 0.80 | 0.00 | 0.00 | 0.20 | A | 16 | 0.80 |
| 877 | 2 | 3 | 0 | 0 | 5 | 0.40 | 0.60 | 0.00 | 0.00 | T | 17 | 0.60 |
| 878 | 2 | 3 | 0 | 3 | 8 | 0.25 | 0.38 | 0.00 | 0.38 | C | 12 | 0.38 |
| 879 | 3 | 1 | 2 | 3 | 9 | 0.33 | 0.11 | 0.22 | 0.33 | N | 11 | 0.33 |
| 880 | 4 | 1 | 2 | 1 | 8 | 0.50 | 0.12 | 0.25 | 0.12 | N | 5 | 0.50 |
| 881 | 1 | 0 | 2 | 1 | 4 | 0.25 | 0.00 | 0.50 | 0.25 | G | 5 | 0.50 |
| 882 | 1 | 3 | 0 | 3 | 7 | 0.14 | 0.43 | 0.00 | 0.43 | C | 6 | 0.43 |
| 883 | 0 | 3 | 0 | 3 | 6 | 0.00 | 0.50 | 0.00 | 0.50 | C | 6 | 0.50 |
| 884 | 2 | 1 | 2 | 2 | 7 | 0.29 | 0.14 | 0.29 | 0.29 | N | 6 | 0.29 |
| 885 | 1 | 0 | 0 | 0 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | A | 8 | 1.00 |
| 886 | 1 | 0 | 3 | 0 | 4 | 0.25 | 0.00 | 0.75 | 0.00 | G | 8 | 0.75 |
| 887 | 0 | 3 | 2 | 2 | 7 | 0.00 | 0.43 | 0.29 | 0.29 | T | 6 | 0.43 |
| 888 | 3 | 3 | 3 | 0 | 9 | 0.33 | 0.33 | 0.33 | 0.00 | A | 6 | 0.33 |
| 889 | 3 | 0 | 4 | 0 | 7 | 0.43 | 0.00 | 0.57 | 0.00 | G | 7 | 0.57 |
| 890 | 0 | 0 | 0 | 5 | 5 | 0.00 | 0.00 | 0.00 | 1.00 | C | 13 | 1.00 |
| 891 | 1 | 0 | 3 | 0 | 4 | 0.25 | 0.00 | 0.75 | 0.00 | G | 6 | 0.75 |
| 892 | 1 | 1 | 4 | 1 | 7 | 0.14 | 0.14 | 0.57 | 0.14 | N | 17 | 0.57 |
| 893 | 5 | 1 | 0 | 3 | 9 | 0.56 | 0.11 | 0.00 | 0.33 | A | 26 | 0.56 |
| 894 | 0 | 2 | 1 | 3 | 6 | 0.00 | 0.33 | 0.17 | 0.50 | C | 17 | 0.50 |
| 895 | 2 | 2 | 2 | 2 | 8 | 0.25 | 0.25 | 0.25 | 0.25 | N | 11 | 0.25 |
| 896 | 2 | 1 | 3 | 2 | 8 | 0.25 | 0.12 | 0.38 | 0.25 | N | 6 | 0.38 |
| 897 | 1 | 2 | 3 | 0 | 6 | 0.17 | 0.33 | 0.50 | 0.00 | G | 7 | 0.50 |
| 898 | 5 | 3 | 3 | 0 | 11 | 0.45 | 0.27 | 0.27 | 0.00 | A | 7 | 0.45 |
| 899 | 0 | 0 | 0 | 1 | 1 | 0.00 | 0.00 | 0.00 | 1.00 | C | 10 | 1.00 |
| 900 | 3 | 4 | 1 | 0 | 8 | 0.38 | 0.50 | 0.12 | 0.00 | T | 13 | 0.50 |
| 901 | 0 | 3 | 0 | 3 | 6 | 0.00 | 0.50 | 0.00 | 0.50 | C | 6 | 0.50 |
| 902 | 1 | 2 | 3 | 7 | 13 | 0.08 | 0.15 | 0.23 | 0.54 | C | 22 | 0.54 |
| 903 | 1 | 2 | 3 | 4 | 10 | 0.10 | 0.20 | 0.30 | 0.40 | N | 6 | 0.40 |
| 904 | 4 | 0 | 3 | 1 | 8 | 0.50 | 0.00 | 0.38 | 0.12 | A | 9 | 0.50 |
| 905 | 1 | 0 | 2 | 2 | 5 | 0.20 | 0.00 | 0.40 | 0.40 | C | 6 | 0.40 |
| 906 | 0 | 4 | 0 | 3 | 7 | 0.00 | 0.57 | 0.00 | 0.43 | T | 9 | 0.57 |
| 907 | 0 | 4 | 0 | 5 | 9 | 0.00 | 0.44 | 0.00 | 0.56 | C | 10 | 0.56 |
| 908 | 4 | 2 | 3 | 2 | 11 | 0.36 | 0.18 | 0.27 | 0.18 | N | 10 | 0.36 |
| 909 | 1 | 0 | 3 | 1 | 5 | 0.20 | 0.00 | 0.60 | 0.20 | G | 10 | 0.60 |
| 910 | 0 | 5 | 0 | 0 | 5 | 0.00 | 1.00 | 0.00 | 0.00 | T | 11 | 1.00 |
| 911 | 1 | 5 | 2 | 2 | 10 | 0.10 | 0.50 | 0.20 | 0.20 | T | 13 | 0.50 |
| 912 | 4 | 0 | 1 | 2 | 7 | 0.57 | 0.00 | 0.14 | 0.29 | A | 14 | 0.57 |
| 913 | 1 | 0 | 4 | 2 | 7 | 0.14 | 0.00 | 0.57 | 0.29 | G | 7 | 0.57 |
| 914 | 1 | 0 | 4 | 0 | 5 | 0.20 | 0.00 | 0.80 | 0.00 | G | 9 | 0.80 |
| 915 | 1 | 5 | 2 | 0 | 8 | 0.12 | 0.62 | 0.25 | 0.00 | T | 6 | 0.62 |
| 916 | 0 | 4 | 2 | 2 | 8 | 0.00 | 0.50 | 0.25 | 0.25 | T | 9 | 0.50 |
| 917 | 2 | 0 | 3 | 0 | 5 | 0.40 | 0.00 | 0.60 | 0.00 | G | 6 | 0.60 |
| 918 | 4 | 3 | 0 | 2 | 9 | 0.44 | 0.33 | 0.00 | 0.22 | A | 9 | 0.44 |
| 919 | 2 | 2 | 3 | 1 | 8 | 0.25 | 0.25 | 0.38 | 0.12 | N | 7 | 0.38 |
| 920 | 2 | 2 | 2 | 3 | 9 | 0.22 | 0.22 | 0.22 | 0.33 | N | 9 | 0.33 |
| 921 | 2 | 0 | 4 | 1 | 7 | 0.29 | 0.00 | 0.57 | 0.14 | G | 8 | 0.57 |
| 922 | 3 | 1 | 2 | 0 | 6 | 0.50 | 0.17 | 0.33 | 0.00 | A | 15 | 0.50 |
| 923 | 1 | 0 | 0 | 1 | 2 | 0.50 | 0.00 | 0.00 | 0.50 | A | 13 | 0.50 |
| 924 | 2 | 4 | 0 | 3 | 9 | 0.22 | 0.44 | 0.00 | 0.33 | T | 13 | 0.44 |
| 925 | 2 | 0 | 2 | 3 | 7 | 0.29 | 0.00 | 0.29 | 0.43 | C | 13 | 0.43 |
| 926 | 3 | 0 | 3 | 1 | 7 | 0.43 | 0.00 | 0.43 | 0.14 | A | 15 | 0.43 |
| 927 | 4 | 0 | 3 | 2 | 9 | 0.44 | 0.00 | 0.33 | 0.22 | A | 7 | 0.44 |
| 928 | 2 | 2 | 2 | 2 | 8 | 0.25 | 0.25 | 0.25 | 0.25 | N | 6 | 0.25 |
| 929 | 2 | 0 | 3 | 3 | 8 | 0.25 | 0.00 | 0.38 | 0.38 | C | 9 | 0.38 |
| 930 | 1 | 2 | 3 | 2 | 8 | 0.12 | 0.25 | 0.38 | 0.25 | N | 6 | 0.38 |
| 931 | 1 | 2 | 1 | 4 | 8 | 0.12 | 0.25 | 0.12 | 0.50 | N | 8 | 0.50 |
| 932 | 1 | 2 | 0 | 2 | 5 | 0.20 | 0.40 | 0.00 | 0.40 | C | 7 | 0.40 |
| 933 | 3 | 2 | 0 | 0 | 5 | 0.60 | 0.40 | 0.00 | 0.00 | A | 14 | 0.60 |
| 934 | 5 | 0 | 0 | 0 | 5 | 1.00 | 0.00 | 0.00 | 0.00 | A | 8 | 1.00 |
| 935 | 6 | 1 | 0 | 0 | 7 | 0.86 | 0.14 | 0.00 | 0.00 | A | 26 | 0.86 |
| 936 | 5 | 1 | 2 | 1 | 9 | 0.56 | 0.11 | 0.22 | 0.11 | A | 18 | 0.56 |
| 937 | 2 | 1 | 2 | 2 | 7 | 0.29 | 0.14 | 0.29 | 0.29 | N | 5 | 0.29 |
| 938 | 0 | 1 | 0 | 3 | 4 | 0.00 | 0.25 | 0.00 | 0.75 | C | 8 | 0.75 |
| 939 | 1 | 1 | 1 | 2 | 5 | 0.20 | 0.20 | 0.20 | 0.40 | N | 6 | 0.40 |
| 940 | 2 | 1 | 0 | 3 | 6 | 0.33 | 0.17 | 0.00 | 0.50 | C | 8 | 0.50 |
| 941 | 1 | 0 | 3 | 4 | 8 | 0.12 | 0.00 | 0.38 | 0.50 | C | 5 | 0.50 |
| 942 | 0 | 2 | 2 | 7 | 11 | 0.00 | 0.18 | 0.18 | 0.64 | C | 24 | 0.64 |
| 943 | 0 | 3 | 0 | 0 | 3 | 0.00 | 1.00 | 0.00 | 0.00 | T | 12 | 1.00 |
| 944 | 0 | 3 | 0 | 6 | 9 | 0.00 | 0.33 | 0.00 | 0.67 | C | 25 | 0.67 |
| 945 | 0 | 3 | 0 | 0 | 3 | 0.00 | 1.00 | 0.00 | 0.00 | T | 6 | 1.00 |
| 946 | 3 | 3 | 3 | 0 | 9 | 0.33 | 0.33 | 0.33 | 0.00 | A | 6 | 0.33 |
| 947 | 2 | 0 | 5 | 1 | 8 | 0.25 | 0.00 | 0.62 | 0.12 | G | 6 | 0.62 |
| 948 | 0 | 0 | 5 | 1 | 6 | 0.00 | 0.00 | 0.83 | 0.17 | G | 11 | 0.83 |
| 949 | 0 | 1 | 4 | 0 | 5 | 0.00 | 0.20 | 0.80 | 0.00 | G | 7 | 0.80 |
| 950 | 2 | 1 | 3 | 1 | 7 | 0.29 | 0.14 | 0.43 | 0.14 | N | 9 | 0.43 |
| 951 | 0 | 1 | 3 | 2 | 6 | 0.00 | 0.17 | 0.50 | 0.33 | G | 6 | 0.50 |
| 952 | 2 | 5 | 3 | 2 | 12 | 0.17 | 0.42 | 0.25 | 0.17 | N | 17 | 0.42 |
| 953 | 0 | 0 | 3 | 0 | 3 | 0.00 | 0.00 | 1.00 | 0.00 | G | 7 | 1.00 |
| 954 | 1 | 0 | 0 | 0 | 1 | 1.00 | 0.00 | 0.00 | 0.00 | A | 7 | 1.00 |
| 955 | 3 | 0 | 2 | 0 | 5 | 0.60 | 0.00 | 0.40 | 0.00 | A | 6 | 0.60 |
| 956 | 0 | 3 | 2 | 0 | 5 | 0.00 | 0.60 | 0.40 | 0.00 | T | 9 | 0.60 |
| 957 | 5 | 0 | 1 | 0 | 6 | 0.83 | 0.00 | 0.17 | 0.00 | A | 13 | 0.83 |
| 958 | 3 | 1 | 2 | 3 | 9 | 0.33 | 0.11 | 0.22 | 0.33 | N | 6 | 0.33 |
| 959 | 3 | 2 | 1 | 2 | 8 | 0.38 | 0.25 | 0.12 | 0.25 | N | 11 | 0.38 |
| 960 | 3 | 0 | 2 | 1 | 6 | 0.50 | 0.00 | 0.33 | 0.17 | A | 8 | 0.50 |
| 961 | 2 | 0 | 1 | 1 | 4 | 0.50 | 0.00 | 0.25 | 0.25 | A | 11 | 0.50 |
| 962 | 4 | 2 | 3 | 1 | 10 | 0.40 | 0.20 | 0.30 | 0.10 | N | 20 | 0.40 |
| 963 | 2 | 2 | 2 | 1 | 7 | 0.29 | 0.29 | 0.29 | 0.14 | N | 6 | 0.29 |
| 964 | 2 | 2 | 2 | 0 | 6 | 0.33 | 0.33 | 0.33 | 0.00 | A | 6 | 0.33 |
| 965 | 2 | 0 | 2 | 0 | 4 | 0.50 | 0.00 | 0.50 | 0.00 | A | 13 | 0.50 |
| 966 | 2 | 0 | 4 | 0 | 6 | 0.33 | 0.00 | 0.67 | 0.00 | G | 8 | 0.67 |
| 967 | 2 | 0 | 2 | 2 | 6 | 0.33 | 0.00 | 0.33 | 0.33 | A | 9 | 0.33 |
| 968 | 2 | 2 | 1 | 2 | 7 | 0.29 | 0.29 | 0.14 | 0.29 | N | 6 | 0.29 |
| 969 | 3 | 2 | 1 | 4 | 10 | 0.30 | 0.20 | 0.10 | 0.40 | N | 5 | 0.40 |
| 970 | 1 | 2 | 3 | 3 | 9 | 0.11 | 0.22 | 0.33 | 0.33 | N | 11 | 0.33 |
| 971 | 2 | 0 | 3 | 1 | 6 | 0.33 | 0.00 | 0.50 | 0.17 | G | 6 | 0.50 |
| 972 | 1 | 1 | 4 | 1 | 7 | 0.14 | 0.14 | 0.57 | 0.14 | N | 10 | 0.57 |
| 973 | 1 | 0 | 3 | 1 | 5 | 0.20 | 0.00 | 0.60 | 0.20 | G | 6 | 0.60 |
| 974 | 2 | 1 | 3 | 0 | 6 | 0.33 | 0.17 | 0.50 | 0.00 | G | 10 | 0.50 |
| 975 | 2 | 1 | 1 | 2 | 6 | 0.33 | 0.17 | 0.17 | 0.33 | N | 6 | 0.33 |
| 976 | 2 | 0 | 2 | 3 | 7 | 0.29 | 0.00 | 0.29 | 0.43 | C | 13 | 0.43 |
| 977 | 2 | 2 | 2 | 2 | 8 | 0.25 | 0.25 | 0.25 | 0.25 | N | 8 | 0.25 |
| 978 | 2 | 2 | 3 | 1 | 8 | 0.25 | 0.25 | 0.38 | 0.12 | N | 6 | 0.38 |
| 979 | 2 | 0 | 3 | 0 | 5 | 0.40 | 0.00 | 0.60 | 0.00 | G | 13 | 0.60 |
| 980 | 0 | 0 | 3 | 1 | 4 | 0.00 | 0.00 | 0.75 | 0.25 | G | 14 | 0.75 |
| 981 | 2 | 0 | 1 | 1 | 4 | 0.50 | 0.00 | 0.25 | 0.25 | A | 18 | 0.50 |
| 982 | 4 | 0 | 1 | 2 | 7 | 0.57 | 0.00 | 0.14 | 0.29 | A | 23 | 0.57 |
| 983 | 4 | 1 | 1 | 0 | 6 | 0.67 | 0.17 | 0.17 | 0.00 | A | 21 | 0.67 |
| 984 | 4 | 1 | 2 | 0 | 7 | 0.57 | 0.14 | 0.29 | 0.00 | A | 22 | 0.57 |
| 985 | 0 | 1 | 2 | 1 | 4 | 0.00 | 0.25 | 0.50 | 0.25 | G | 6 | 0.50 |
| 986 | 0 | 0 | 2 | 1 | 3 | 0.00 | 0.00 | 0.67 | 0.33 | G | 10 | 0.67 |
| 987 | 2 | 0 | 3 | 0 | 5 | 0.40 | 0.00 | 0.60 | 0.00 | G | 10 | 0.60 |
| 988 | 0 | 0 | 3 | 2 | 5 | 0.00 | 0.00 | 0.60 | 0.40 | G | 9 | 0.60 |
| 989 | 3 | 0 | 1 | 3 | 7 | 0.43 | 0.00 | 0.14 | 0.43 | A | 16 | 0.43 |
| 990 | 0 | 0 | 0 | 3 | 3 | 0.00 | 0.00 | 0.00 | 1.00 | C | 6 | 1.00 |
| 991 | 2 | 0 | 0 | 3 | 5 | 0.40 | 0.00 | 0.00 | 0.60 | C | 6 | 0.60 |
| 992 | 1 | 4 | 2 | 0 | 7 | 0.14 | 0.57 | 0.29 | 0.00 | T | 7 | 0.57 |
| 993 | 1 | 0 | 4 | 0 | 5 | 0.20 | 0.00 | 0.80 | 0.00 | G | 5 | 0.80 |
| 994 | 1 | 0 | 4 | 0 | 5 | 0.20 | 0.00 | 0.80 | 0.00 | G | 4 | 0.80 |
| 995 | 1 | 0 | 3 | 4 | 8 | 0.12 | 0.00 | 0.38 | 0.50 | C | 5 | 0.50 |
| 996 | 1 | 0 | 1 | 5 | 7 | 0.14 | 0.00 | 0.14 | 0.71 | C | 21 | 0.71 |
| 997 | 0 | 2 | 1 | 7 | 10 | 0.00 | 0.20 | 0.10 | 0.70 | C | 26 | 0.70 |
| 998 | 0 | 3 | 0 | 4 | 7 | 0.00 | 0.43 | 0.00 | 0.57 | C | 6 | 0.57 |
| 999 | 1 | 4 | 1 | 3 | 9 | 0.11 | 0.44 | 0.11 | 0.33 | N | 13 | 0.44 |
| 1000 | 2 | 0 | 1 | 4 | 7 | 0.29 | 0.00 | 0.14 | 0.57 | C | 31 | 0.57 |
| 1001 | 1 | 0 | 1 | 1 | 3 | 0.33 | 0.00 | 0.33 | 0.33 | A | 8 | 0.33 |
| 1002 | 2 | 2 | 1 | 2 | 7 | 0.29 | 0.29 | 0.14 | 0.29 | N | 9 | 0.29 |
| 1003 | 0 | 3 | 1 | 2 | 6 | 0.00 | 0.50 | 0.17 | 0.33 | T | 9 | 0.50 |
| 1004 | 2 | 3 | 2 | 1 | 8 | 0.25 | 0.38 | 0.25 | 0.12 | N | 9 | 0.38 |
| 1005 | 0 | 3 | 2 | 0 | 5 | 0.00 | 0.60 | 0.40 | 0.00 | T | 6 | 0.60 |
| 1006 | 0 | 0 | 2 | 0 | 2 | 0.00 | 0.00 | 1.00 | 0.00 | G | 13 | 1.00 |
| 1007 | 1 | 2 | 2 | 3 | 8 | 0.12 | 0.25 | 0.25 | 0.38 | N | 13 | 0.38 |
| 1008 | 1 | 2 | 2 | 2 | 7 | 0.14 | 0.29 | 0.29 | 0.29 | N | 6 | 0.29 |
| 1009 | 0 | 0 | 4 | 2 | 6 | 0.00 | 0.00 | 0.67 | 0.33 | G | 9 | 0.67 |
| 1010 | 3 | 0 | 1 | 2 | 6 | 0.50 | 0.00 | 0.17 | 0.33 | A | 6 | 0.50 |
| 1011 | 0 | 4 | 1 | 2 | 7 | 0.00 | 0.57 | 0.14 | 0.29 | T | 6 | 0.57 |
| 1012 | 0 | 4 | 0 | 0 | 4 | 0.00 | 1.00 | 0.00 | 0.00 | T | 6 | 1.00 |
| 1013 | 0 | 4 | 1 | 3 | 8 | 0.00 | 0.50 | 0.12 | 0.38 | T | 7 | 0.50 |
| 1014 | 2 | 2 | 2 | 1 | 7 | 0.29 | 0.29 | 0.29 | 0.14 | N | 7 | 0.29 |
| 1015 | 0 | 2 | 2 | 2 | 6 | 0.00 | 0.33 | 0.33 | 0.33 | C | 5 | 0.33 |
| 1016 | 4 | 1 | 3 | 1 | 9 | 0.44 | 0.11 | 0.33 | 0.11 | N | 4 | 0.44 |
| 1017 | 2 | 0 | 3 | 1 | 6 | 0.33 | 0.00 | 0.50 | 0.17 | G | 5 | 0.50 |
| 1018 | 2 | 1 | 0 | 2 | 5 | 0.40 | 0.20 | 0.00 | 0.40 | A | 7 | 0.40 |
| 1019 | 2 | 2 | 5 | 3 | 12 | 0.17 | 0.17 | 0.42 | 0.25 | N | 6 | 0.42 |
| 1020 | 3 | 3 | 3 | 3 | 12 | 0.25 | 0.25 | 0.25 | 0.25 | N | 6 | 0.25 |
| 1021 | 1 | 3 | 0 | 1 | 5 | 0.20 | 0.60 | 0.00 | 0.20 | T | 6 | 0.60 |
| 1022 | 3 | 2 | 1 | 1 | 7 | 0.43 | 0.29 | 0.14 | 0.14 | N | 7 | 0.43 |
| 1023 | 4 | 0 | 1 | 0 | 5 | 0.80 | 0.00 | 0.20 | 0.00 | A | 15 | 0.80 |
| 1024 | 3 | 0 | 0 | 2 | 5 | 0.60 | 0.00 | 0.00 | 0.40 | A | 9 | 0.60 |
| 1025 | 3 | 0 | 1 | 1 | 5 | 0.60 | 0.00 | 0.20 | 0.20 | A | 31 | 0.60 |
| 1026 | 2 | 0 | 0 | 2 | 4 | 0.50 | 0.00 | 0.00 | 0.50 | A | 12 | 0.50 |
| 1027 | 2 | 1 | 0 | 1 | 4 | 0.50 | 0.25 | 0.00 | 0.25 | A | 8 | 0.50 |
| 1028 | 3 | 1 | 0 | 1 | 5 | 0.60 | 0.20 | 0.00 | 0.20 | A | 26 | 0.60 |
| 1029 | 3 | 1 | 0 | 1 | 5 | 0.60 | 0.20 | 0.00 | 0.20 | A | 11 | 0.60 |
| 1030 | 0 | 2 | 1 | 1 | 4 | 0.00 | 0.50 | 0.25 | 0.25 | T | 14 | 0.50 |
| 1031 | 2 | 0 | 1 | 1 | 4 | 0.50 | 0.00 | 0.25 | 0.25 | A | 14 | 0.50 |
| 1032 | 2 | 0 | 0 | 2 | 4 | 0.50 | 0.00 | 0.00 | 0.50 | A | 8 | 0.50 |
| 1033 | 2 | 3 | 0 | 2 | 7 | 0.29 | 0.43 | 0.00 | 0.29 | T | 19 | 0.43 |
| 1034 | 1 | 3 | 1 | 3 | 8 | 0.12 | 0.38 | 0.12 | 0.38 | N | 6 | 0.38 |
| 1035 | 3 | 0 | 0 | 2 | 5 | 0.60 | 0.00 | 0.00 | 0.40 | A | 11 | 0.60 |
| 1036 | 0 | 4 | 1 | 0 | 5 | 0.00 | 0.80 | 0.20 | 0.00 | T | 16 | 0.80 |
| 1037 | 1 | 0 | 1 | 0 | 2 | 0.50 | 0.00 | 0.50 | 0.00 | A | 10 | 0.50 |
| 1038 | 3 | 3 | 1 | 0 | 7 | 0.43 | 0.43 | 0.14 | 0.00 | A | 8 | 0.43 |
| 1039 | 0 | 0 | 0 | 1 | 1 | 0.00 | 0.00 | 0.00 | 1.00 | C | 20 | 1.00 |
| 1040 | 1 | 1 | 2 | 2 | 6 | 0.17 | 0.17 | 0.33 | 0.33 | N | 9 | 0.33 |
| 1041 | 0 | 1 | 2 | 2 | 5 | 0.00 | 0.20 | 0.40 | 0.40 | C | 12 | 0.40 |
| 1042 | 1 | 0 | 1 | 2 | 4 | 0.25 | 0.00 | 0.25 | 0.50 | C | 10 | 0.50 |
| 1043 | 0 | 0 | 1 | 3 | 4 | 0.00 | 0.00 | 0.25 | 0.75 | C | 14 | 0.75 |
| 1044 | 2 | 0 | 0 | 3 | 5 | 0.40 | 0.00 | 0.00 | 0.60 | C | 11 | 0.60 |
| 1045 | 2 | 0 | 2 | 2 | 6 | 0.33 | 0.00 | 0.33 | 0.33 | A | 12 | 0.33 |
| 1046 | 3 | 0 | 2 | 0 | 5 | 0.60 | 0.00 | 0.40 | 0.00 | A | 9 | 0.60 |
| 1047 | 0 | 0 | 2 | 1 | 3 | 0.00 | 0.00 | 0.67 | 0.33 | G | 10 | 0.67 |
| 1048 | 0 | 0 | 2 | 0 | 2 | 0.00 | 0.00 | 1.00 | 0.00 | G | 7 | 1.00 |
| 1049 | 1 | 3 | 0 | 0 | 4 | 0.25 | 0.75 | 0.00 | 0.00 | T | 8 | 0.75 |
| 1050 | 2 | 3 | 2 | 0 | 7 | 0.29 | 0.43 | 0.29 | 0.00 | T | 9 | 0.43 |
| 1051 | 2 | 0 | 1 | 0 | 3 | 0.67 | 0.00 | 0.33 | 0.00 | A | 9 | 0.67 |
| 1052 | 2 | 0 | 1 | 0 | 3 | 0.67 | 0.00 | 0.33 | 0.00 | A | 9 | 0.67 |
| 1053 | 2 | 0 | 1 | 0 | 3 | 0.67 | 0.00 | 0.33 | 0.00 | A | 5 | 0.67 |
| 1054 | 2 | 1 | 1 | 0 | 4 | 0.50 | 0.25 | 0.25 | 0.00 | A | 5 | 0.50 |
| 1055 | 1 | 1 | 2 | 2 | 6 | 0.17 | 0.17 | 0.33 | 0.33 | N | 9 | 0.33 |
| 1056 | 1 | 1 | 0 | 0 | 2 | 0.50 | 0.50 | 0.00 | 0.00 | A | 5 | 0.50 |
| 1057 | 1 | 0 | 1 | 0 | 2 | 0.50 | 0.00 | 0.50 | 0.00 | A | 6 | 0.50 |
| 1058 | 0 | 1 | 1 | 3 | 5 | 0.00 | 0.20 | 0.20 | 0.60 | C | 6 | 0.60 |
| 1059 | 2 | 1 | 0 | 3 | 6 | 0.33 | 0.17 | 0.00 | 0.50 | C | 5 | 0.50 |
| 1060 | 1 | 3 | 0 | 2 | 6 | 0.17 | 0.50 | 0.00 | 0.33 | T | 9 | 0.50 |
| 1061 | 1 | 1 | 0 | 3 | 5 | 0.20 | 0.20 | 0.00 | 0.60 | C | 17 | 0.60 |
| 1062 | 1 | 1 | 0 | 1 | 3 | 0.33 | 0.33 | 0.00 | 0.33 | A | 11 | 0.33 |
| 1063 | 0 | 2 | 1 | 2 | 5 | 0.00 | 0.40 | 0.20 | 0.40 | C | 6 | 0.40 |
| 1064 | 1 | 0 | 0 | 3 | 4 | 0.25 | 0.00 | 0.00 | 0.75 | C | 5 | 0.75 |
| 1065 | 0 | 0 | 0 | 3 | 3 | 0.00 | 0.00 | 0.00 | 1.00 | C | 14 | 1.00 |
| 1066 | 0 | 2 | 2 | 2 | 6 | 0.00 | 0.33 | 0.33 | 0.33 | C | 6 | 0.33 |
| 1067 | 1 | 3 | 0 | 3 | 7 | 0.14 | 0.43 | 0.00 | 0.43 | C | 5 | 0.43 |
Trimming thresholds :
| Raw sequence information | Values |
|---|---|
| Raw sequence length : | 1067 bp |
| Mean of raw sequence Phred quality scores : | 14.96 |
| Quality report - Trimmed sequence information | Values |
|---|---|
| Trimmed sequence length : | 46 bp |
| Trimmed sequence start position : | 24 |
| Trimmed sequence end position : | 70 |
| Mean of trimmed sequence Phred quality scores : | 27.67 |
Trimming thresholds :
| Raw sequence information | Values |
|---|---|
| Raw sequence length : | 1067 bp |
| Mean of raw sequence primary peak ratios : | 0.6 |
| Percentage of non-mixed positions on raw sequence : | 22.96 % |
| Mixed peak report - Trimmed sequence information | Values |
|---|---|
| Trimmed sequence length : | 798 bp |
| Trimmed sequence start position : | 3 |
| Trimmed sequence end position : | 800 |
| Mean of trimmed sequence primary peak ratios : | 0.62 |
| Percentage of non-mixed positions on trimmed sequence : | 24.56 % |
Warning: Trimmed sequence from the sequencing result #1 was found with insufficient length or insufficient quality and will not be used.
| Final trimmed sequence information | Values |
|---|---|
| Length : | 47 bp |
| Start position : | 24 |
| End position : | 70 |
| Mean of Phred quality scores : | 27.96 |
| Mean of primary peak ratio : | 0.86 |
| Percentage of non-mixed positions : | 78.72 % |
Sequence of primary peaks:
Length: 225 bp
## CAATAAATTCCATACCCTCTAACCTATAATTACTAAACCCTTTAGTGAGGGTTAATTACCCCCCCCATACCACTAATTAACTAAAAATTCACCTACCAACCACAACCAATCAACAACACAAACCCCTCCCCAAAACAAAACTAACAACCCACCCACCCAACCTCACATAAACACAATAACCCTCTAACCTAAAATTACTAAACCCTTTAGTGAGGGTTAATTAAA
Open chromatogram file in a new tab
| Position | A peak | T peak | G peak | C peak | Total | A ratio | T ratio | G ratio | C ratio | Primary base | Quality score | Primary ratio |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 0 | 0 | 0 | 1463 | 1463 | 0.00 | 0.00 | 0.00 | 1.00 | C | 6 | 1.00 |
| 2 | 1961 | 1219 | 0 | 0 | 3180 | 0.62 | 0.38 | 0.00 | 0.00 | A | 8 | 0.62 |
| 3 | 1567 | 1163 | 0 | 1001 | 3731 | 0.42 | 0.31 | 0.00 | 0.27 | A | 3 | 0.42 |
| 4 | 0 | 2272 | 0 | 1 | 2273 | 0.00 | 1.00 | 0.00 | 0.00 | T | 13 | 1.00 |
| 5 | 2387 | 1968 | 0 | 0 | 4355 | 0.55 | 0.45 | 0.00 | 0.00 | A | 11 | 0.55 |
| 6 | 2383 | 0 | 0 | 856 | 3239 | 0.74 | 0.00 | 0.00 | 0.26 | A | 11 | 0.74 |
| 7 | 1563 | 0 | 0 | 0 | 1563 | 1.00 | 0.00 | 0.00 | 0.00 | A | 17 | 1.00 |
| 8 | 1 | 2101 | 0 | 0 | 2102 | 0.00 | 1.00 | 0.00 | 0.00 | T | 43 | 1.00 |
| 9 | 1 | 2861 | 0 | 0 | 2862 | 0.00 | 1.00 | 0.00 | 0.00 | T | 44 | 1.00 |
| 10 | 0 | 0 | 0 | 1518 | 1518 | 0.00 | 0.00 | 0.00 | 1.00 | C | 44 | 1.00 |
| 11 | 0 | 2 | 0 | 1639 | 1641 | 0.00 | 0.00 | 0.00 | 1.00 | C | 36 | 1.00 |
| 12 | 1316 | 0 | 0 | 0 | 1316 | 1.00 | 0.00 | 0.00 | 0.00 | A | 28 | 1.00 |
| 13 | 0 | 1178 | 0 | 226 | 1404 | 0.00 | 0.84 | 0.00 | 0.16 | T | 29 | 0.84 |
| 14 | 1381 | 0 | 15 | 0 | 1396 | 0.99 | 0.00 | 0.01 | 0.00 | A | 26 | 0.99 |
| 15 | 0 | 0 | 0 | 1258 | 1258 | 0.00 | 0.00 | 0.00 | 1.00 | C | 26 | 1.00 |
| 16 | 0 | 2 | 0 | 943 | 945 | 0.00 | 0.00 | 0.00 | 1.00 | C | 46 | 1.00 |
| 17 | 0 | 2 | 0 | 1309 | 1311 | 0.00 | 0.00 | 0.00 | 1.00 | C | 46 | 1.00 |
| 18 | 0 | 2168 | 0 | 0 | 2168 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 19 | 81 | 0 | 0 | 1484 | 1565 | 0.05 | 0.00 | 0.00 | 0.95 | C | 46 | 0.95 |
| 20 | 0 | 1280 | 9 | 0 | 1289 | 0.00 | 0.99 | 0.01 | 0.00 | T | 51 | 0.99 |
| 21 | 1553 | 0 | 0 | 0 | 1553 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 22 | 1075 | 2 | 336 | 0 | 1413 | 0.76 | 0.00 | 0.24 | 0.00 | A | 26 | 0.76 |
| 23 | 0 | 0 | 0 | 875 | 875 | 0.00 | 0.00 | 0.00 | 1.00 | C | 25 | 1.00 |
| 24 | 55 | 1 | 0 | 1153 | 1209 | 0.05 | 0.00 | 0.00 | 0.95 | C | 51 | 0.95 |
| 25 | 0 | 1170 | 0 | 0 | 1170 | 0.00 | 1.00 | 0.00 | 0.00 | T | 29 | 1.00 |
| 26 | 1433 | 0 | 0 | 0 | 1433 | 1.00 | 0.00 | 0.00 | 0.00 | A | 21 | 1.00 |
| 27 | 0 | 208 | 0 | 0 | 208 | 0.00 | 1.00 | 0.00 | 0.00 | T | 16 | 1.00 |
| 28 | 861 | 0 | 0 | 0 | 861 | 1.00 | 0.00 | 0.00 | 0.00 | A | 21 | 1.00 |
| 29 | 504 | 0 | 0 | 159 | 663 | 0.76 | 0.00 | 0.00 | 0.24 | A | 14 | 0.76 |
| 30 | 0 | 1698 | 0 | 0 | 1698 | 0.00 | 1.00 | 0.00 | 0.00 | T | 26 | 1.00 |
| 31 | 3 | 2690 | 0 | 0 | 2693 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 32 | 1717 | 2 | 0 | 1 | 1720 | 1.00 | 0.00 | 0.00 | 0.00 | A | 50 | 1.00 |
| 33 | 0 | 0 | 0 | 965 | 965 | 0.00 | 0.00 | 0.00 | 1.00 | C | 50 | 1.00 |
| 34 | 2 | 1309 | 0 | 319 | 1630 | 0.00 | 0.80 | 0.00 | 0.20 | T | 29 | 0.80 |
| 35 | 1192 | 631 | 0 | 0 | 1823 | 0.65 | 0.35 | 0.00 | 0.00 | A | 25 | 0.65 |
| 36 | 951 | 0 | 0 | 0 | 951 | 1.00 | 0.00 | 0.00 | 0.00 | A | 31 | 1.00 |
| 37 | 521 | 0 | 0 | 0 | 521 | 1.00 | 0.00 | 0.00 | 0.00 | A | 16 | 1.00 |
| 38 | 0 | 0 | 0 | 1146 | 1146 | 0.00 | 0.00 | 0.00 | 1.00 | C | 31 | 1.00 |
| 39 | 11 | 0 | 0 | 674 | 685 | 0.02 | 0.00 | 0.00 | 0.98 | C | 49 | 0.98 |
| 40 | 0 | 2 | 0 | 1584 | 1586 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 41 | 0 | 1607 | 0 | 520 | 2127 | 0.00 | 0.76 | 0.00 | 0.24 | T | 32 | 0.76 |
| 42 | 16 | 2225 | 0 | 0 | 2241 | 0.01 | 0.99 | 0.00 | 0.00 | T | 46 | 0.99 |
| 43 | 161 | 1587 | 0 | 0 | 1748 | 0.09 | 0.91 | 0.00 | 0.00 | T | 26 | 0.91 |
| 44 | 1318 | 0 | 0 | 0 | 1318 | 1.00 | 0.00 | 0.00 | 0.00 | A | 29 | 1.00 |
| 45 | 0 | 266 | 1173 | 0 | 1439 | 0.00 | 0.18 | 0.82 | 0.00 | G | 41 | 0.82 |
| 46 | 76 | 1058 | 0 | 0 | 1134 | 0.07 | 0.93 | 0.00 | 0.00 | T | 45 | 0.93 |
| 47 | 94 | 2 | 1035 | 0 | 1131 | 0.08 | 0.00 | 0.92 | 0.00 | G | 31 | 0.92 |
| 48 | 875 | 0 | 0 | 242 | 1117 | 0.78 | 0.00 | 0.00 | 0.22 | A | 25 | 0.78 |
| 49 | 2 | 0 | 1214 | 320 | 1536 | 0.00 | 0.00 | 0.79 | 0.21 | G | 27 | 0.79 |
| 50 | 0 | 0 | 1762 | 350 | 2112 | 0.00 | 0.00 | 0.83 | 0.17 | G | 46 | 0.83 |
| 51 | 0 | 6 | 1152 | 276 | 1434 | 0.00 | 0.00 | 0.80 | 0.19 | G | 48 | 0.80 |
| 52 | 0 | 1375 | 12 | 0 | 1387 | 0.00 | 0.99 | 0.01 | 0.00 | T | 45 | 0.99 |
| 53 | 0 | 1229 | 12 | 0 | 1241 | 0.00 | 0.99 | 0.01 | 0.00 | T | 36 | 0.99 |
| 54 | 1634 | 0 | 0 | 0 | 1634 | 1.00 | 0.00 | 0.00 | 0.00 | A | 28 | 1.00 |
| 55 | 1305 | 0 | 0 | 0 | 1305 | 1.00 | 0.00 | 0.00 | 0.00 | A | 28 | 1.00 |
| 56 | 0 | 1811 | 0 | 0 | 1811 | 0.00 | 1.00 | 0.00 | 0.00 | T | 23 | 1.00 |
| 57 | 0 | 4829 | 0 | 326 | 5155 | 0.00 | 0.94 | 0.00 | 0.06 | T | 30 | 0.94 |
| 58 | 6007 | 13 | 0 | 232 | 6252 | 0.96 | 0.00 | 0.00 | 0.04 | A | 25 | 0.96 |
| 59 | 0 | 0 | 0 | 480 | 480 | 0.00 | 0.00 | 0.00 | 1.00 | C | 14 | 1.00 |
| 60 | 488 | 0 | 0 | 578 | 1066 | 0.46 | 0.00 | 0.00 | 0.54 | C | 6 | 0.54 |
| 61 | 0 | 0 | 0 | 577 | 577 | 0.00 | 0.00 | 0.00 | 1.00 | C | 50 | 1.00 |
| 62 | 0 | 0 | 0 | 683 | 683 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 63 | 0 | 0 | 0 | 633 | 633 | 0.00 | 0.00 | 0.00 | 1.00 | C | 54 | 1.00 |
| 64 | 0 | 0 | 0 | 690 | 690 | 0.00 | 0.00 | 0.00 | 1.00 | C | 55 | 1.00 |
| 65 | 0 | 0 | 0 | 673 | 673 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 66 | 2 | 0 | 0 | 546 | 548 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 67 | 205 | 0 | 62 | 0 | 267 | 0.77 | 0.00 | 0.23 | 0.00 | A | 58 | 0.77 |
| 68 | 2 | 588 | 0 | 0 | 590 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 69 | 480 | 158 | 0 | 0 | 638 | 0.75 | 0.25 | 0.00 | 0.00 | A | 34 | 0.75 |
| 70 | 0 | 0 | 0 | 725 | 725 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 71 | 0 | 0 | 0 | 768 | 768 | 0.00 | 0.00 | 0.00 | 1.00 | C | 41 | 1.00 |
| 72 | 199 | 0 | 0 | 165 | 364 | 0.55 | 0.00 | 0.00 | 0.45 | A | 36 | 0.55 |
| 73 | 0 | 92 | 0 | 490 | 582 | 0.00 | 0.16 | 0.00 | 0.84 | C | 36 | 0.84 |
| 74 | 0 | 717 | 0 | 87 | 804 | 0.00 | 0.89 | 0.00 | 0.11 | T | 58 | 0.89 |
| 75 | 561 | 235 | 0 | 0 | 796 | 0.70 | 0.30 | 0.00 | 0.00 | A | 31 | 0.70 |
| 76 | 422 | 0 | 0 | 1 | 423 | 1.00 | 0.00 | 0.00 | 0.00 | A | 29 | 1.00 |
| 77 | 0 | 431 | 0 | 13 | 444 | 0.00 | 0.97 | 0.00 | 0.03 | T | 58 | 0.97 |
| 78 | 0 | 1107 | 0 | 0 | 1107 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 79 | 527 | 0 | 0 | 0 | 527 | 1.00 | 0.00 | 0.00 | 0.00 | A | 36 | 1.00 |
| 80 | 341 | 2 | 4 | 1 | 348 | 0.98 | 0.01 | 0.01 | 0.00 | A | 28 | 0.98 |
| 81 | 0 | 224 | 0 | 356 | 580 | 0.00 | 0.39 | 0.00 | 0.61 | C | 16 | 0.61 |
| 82 | 2 | 719 | 0 | 0 | 721 | 0.00 | 1.00 | 0.00 | 0.00 | T | 29 | 1.00 |
| 83 | 502 | 0 | 0 | 0 | 502 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 84 | 469 | 3 | 0 | 0 | 472 | 0.99 | 0.01 | 0.00 | 0.00 | A | 58 | 0.99 |
| 85 | 449 | 0 | 6 | 0 | 455 | 0.99 | 0.00 | 0.01 | 0.00 | A | 58 | 0.99 |
| 86 | 394 | 0 | 51 | 0 | 445 | 0.89 | 0.00 | 0.11 | 0.00 | A | 58 | 0.89 |
| 87 | 549 | 0 | 0 | 0 | 549 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 88 | 9 | 699 | 0 | 0 | 708 | 0.01 | 0.99 | 0.00 | 0.00 | T | 51 | 0.99 |
| 89 | 0 | 731 | 0 | 2 | 733 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 90 | 0 | 189 | 0 | 550 | 739 | 0.00 | 0.26 | 0.00 | 0.74 | C | 28 | 0.74 |
| 91 | 189 | 0 | 16 | 186 | 391 | 0.48 | 0.00 | 0.04 | 0.48 | A | 25 | 0.48 |
| 92 | 3 | 0 | 0 | 558 | 561 | 0.01 | 0.00 | 0.00 | 0.99 | C | 28 | 0.99 |
| 93 | 0 | 197 | 0 | 639 | 836 | 0.00 | 0.24 | 0.00 | 0.76 | C | 34 | 0.76 |
| 94 | 0 | 410 | 3 | 0 | 413 | 0.00 | 0.99 | 0.01 | 0.00 | T | 58 | 0.99 |
| 95 | 587 | 0 | 0 | 0 | 587 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 96 | 31 | 0 | 0 | 535 | 566 | 0.05 | 0.00 | 0.00 | 0.95 | C | 41 | 0.95 |
| 97 | 13 | 0 | 0 | 544 | 557 | 0.02 | 0.00 | 0.00 | 0.98 | C | 46 | 0.98 |
| 98 | 321 | 0 | 0 | 0 | 321 | 1.00 | 0.00 | 0.00 | 0.00 | A | 46 | 1.00 |
| 99 | 240 | 2 | 28 | 0 | 270 | 0.89 | 0.01 | 0.10 | 0.00 | A | 51 | 0.89 |
| 100 | 0 | 0 | 0 | 526 | 526 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 101 | 0 | 3 | 15 | 332 | 350 | 0.00 | 0.01 | 0.04 | 0.95 | C | 51 | 0.95 |
| 102 | 314 | 0 | 0 | 0 | 314 | 1.00 | 0.00 | 0.00 | 0.00 | A | 50 | 1.00 |
| 103 | 0 | 0 | 42 | 383 | 425 | 0.00 | 0.00 | 0.10 | 0.90 | C | 41 | 0.90 |
| 104 | 309 | 0 | 0 | 163 | 472 | 0.65 | 0.00 | 0.00 | 0.35 | A | 16 | 0.65 |
| 105 | 340 | 10 | 0 | 6 | 356 | 0.96 | 0.03 | 0.00 | 0.02 | A | 29 | 0.96 |
| 106 | 0 | 2 | 31 | 400 | 433 | 0.00 | 0.00 | 0.07 | 0.92 | C | 48 | 0.92 |
| 107 | 28 | 0 | 0 | 685 | 713 | 0.04 | 0.00 | 0.00 | 0.96 | C | 47 | 0.96 |
| 108 | 376 | 0 | 0 | 0 | 376 | 1.00 | 0.00 | 0.00 | 0.00 | A | 21 | 1.00 |
| 109 | 258 | 178 | 8 | 0 | 444 | 0.58 | 0.40 | 0.02 | 0.00 | A | 17 | 0.58 |
| 110 | 177 | 591 | 0 | 2 | 770 | 0.23 | 0.77 | 0.00 | 0.00 | T | 26 | 0.77 |
| 111 | 2 | 76 | 0 | 605 | 683 | 0.00 | 0.11 | 0.00 | 0.89 | C | 36 | 0.89 |
| 112 | 219 | 0 | 0 | 1 | 220 | 1.00 | 0.00 | 0.00 | 0.00 | A | 26 | 1.00 |
| 113 | 282 | 111 | 0 | 2 | 395 | 0.71 | 0.28 | 0.00 | 0.01 | A | 16 | 0.71 |
| 114 | 52 | 0 | 0 | 480 | 532 | 0.10 | 0.00 | 0.00 | 0.90 | C | 26 | 0.90 |
| 115 | 219 | 28 | 5 | 0 | 252 | 0.87 | 0.11 | 0.02 | 0.00 | A | 39 | 0.87 |
| 116 | 437 | 0 | 114 | 0 | 551 | 0.79 | 0.00 | 0.21 | 0.00 | A | 28 | 0.79 |
| 117 | 121 | 0 | 46 | 416 | 583 | 0.21 | 0.00 | 0.08 | 0.71 | C | 20 | 0.71 |
| 118 | 277 | 0 | 0 | 218 | 495 | 0.56 | 0.00 | 0.00 | 0.44 | A | 11 | 0.56 |
| 119 | 15 | 105 | 22 | 366 | 508 | 0.03 | 0.21 | 0.04 | 0.72 | C | 20 | 0.72 |
| 120 | 295 | 0 | 0 | 224 | 519 | 0.57 | 0.00 | 0.00 | 0.43 | A | 16 | 0.57 |
| 121 | 254 | 17 | 89 | 0 | 360 | 0.71 | 0.05 | 0.25 | 0.00 | A | 16 | 0.71 |
| 122 | 456 | 17 | 4 | 94 | 571 | 0.80 | 0.03 | 0.01 | 0.16 | A | 31 | 0.80 |
| 123 | 6 | 40 | 0 | 404 | 450 | 0.01 | 0.09 | 0.00 | 0.90 | C | 50 | 0.90 |
| 124 | 0 | 0 | 0 | 815 | 815 | 0.00 | 0.00 | 0.00 | 1.00 | C | 50 | 1.00 |
| 125 | 0 | 0 | 0 | 832 | 832 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 126 | 0 | 13 | 10 | 631 | 654 | 0.00 | 0.02 | 0.02 | 0.96 | C | 29 | 0.96 |
| 127 | 0 | 946 | 0 | 350 | 1296 | 0.00 | 0.73 | 0.00 | 0.27 | T | 29 | 0.73 |
| 128 | 0 | 294 | 0 | 839 | 1133 | 0.00 | 0.26 | 0.00 | 0.74 | C | 32 | 0.74 |
| 129 | 0 | 1 | 31 | 600 | 632 | 0.00 | 0.00 | 0.05 | 0.95 | C | 51 | 0.95 |
| 130 | 0 | 14 | 0 | 445 | 459 | 0.00 | 0.03 | 0.00 | 0.97 | C | 51 | 0.97 |
| 131 | 1 | 0 | 2 | 599 | 602 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 132 | 239 | 12 | 0 | 106 | 357 | 0.67 | 0.03 | 0.00 | 0.30 | A | 32 | 0.67 |
| 133 | 324 | 0 | 49 | 0 | 373 | 0.87 | 0.00 | 0.13 | 0.00 | A | 58 | 0.87 |
| 134 | 555 | 0 | 1 | 0 | 556 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 135 | 549 | 0 | 0 | 0 | 549 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 136 | 168 | 0 | 18 | 355 | 541 | 0.31 | 0.00 | 0.03 | 0.66 | C | 34 | 0.66 |
| 137 | 372 | 30 | 0 | 0 | 402 | 0.93 | 0.07 | 0.00 | 0.00 | A | 58 | 0.93 |
| 138 | 392 | 12 | 61 | 0 | 465 | 0.84 | 0.03 | 0.13 | 0.00 | A | 58 | 0.84 |
| 139 | 644 | 0 | 49 | 0 | 693 | 0.93 | 0.00 | 0.07 | 0.00 | A | 46 | 0.93 |
| 140 | 392 | 29 | 17 | 0 | 438 | 0.89 | 0.07 | 0.04 | 0.00 | A | 46 | 0.89 |
| 141 | 41 | 149 | 0 | 394 | 584 | 0.07 | 0.26 | 0.00 | 0.67 | C | 31 | 0.67 |
| 142 | 0 | 831 | 0 | 2 | 833 | 0.00 | 1.00 | 0.00 | 0.00 | T | 34 | 1.00 |
| 143 | 689 | 236 | 75 | 0 | 1000 | 0.69 | 0.24 | 0.07 | 0.00 | A | 34 | 0.69 |
| 144 | 597 | 0 | 100 | 3 | 700 | 0.85 | 0.00 | 0.14 | 0.00 | A | 34 | 0.85 |
| 145 | 171 | 11 | 0 | 419 | 601 | 0.28 | 0.02 | 0.00 | 0.70 | C | 34 | 0.70 |
| 146 | 426 | 0 | 15 | 3 | 444 | 0.96 | 0.00 | 0.03 | 0.01 | A | 58 | 0.96 |
| 147 | 386 | 0 | 15 | 0 | 401 | 0.96 | 0.00 | 0.04 | 0.00 | A | 58 | 0.96 |
| 148 | 2 | 0 | 0 | 645 | 647 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 149 | 0 | 0 | 0 | 876 | 876 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 150 | 0 | 0 | 0 | 637 | 637 | 0.00 | 0.00 | 0.00 | 1.00 | C | 41 | 1.00 |
| 151 | 281 | 22 | 0 | 263 | 566 | 0.50 | 0.04 | 0.00 | 0.46 | A | 25 | 0.50 |
| 152 | 0 | 0 | 0 | 615 | 615 | 0.00 | 0.00 | 0.00 | 1.00 | C | 41 | 1.00 |
| 153 | 0 | 17 | 0 | 626 | 643 | 0.00 | 0.03 | 0.00 | 0.97 | C | 58 | 0.97 |
| 154 | 0 | 0 | 0 | 846 | 846 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 155 | 235 | 0 | 31 | 175 | 441 | 0.53 | 0.00 | 0.07 | 0.40 | A | 25 | 0.53 |
| 156 | 0 | 0 | 29 | 602 | 631 | 0.00 | 0.00 | 0.05 | 0.95 | C | 51 | 0.95 |
| 157 | 0 | 0 | 0 | 788 | 788 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 158 | 0 | 0 | 12 | 502 | 514 | 0.00 | 0.00 | 0.02 | 0.98 | C | 51 | 0.98 |
| 159 | 282 | 0 | 4 | 51 | 337 | 0.84 | 0.00 | 0.01 | 0.15 | A | 58 | 0.84 |
| 160 | 319 | 0 | 25 | 42 | 386 | 0.83 | 0.00 | 0.06 | 0.11 | A | 52 | 0.83 |
| 161 | 36 | 0 | 0 | 643 | 679 | 0.05 | 0.00 | 0.00 | 0.95 | C | 52 | 0.95 |
| 162 | 0 | 3 | 0 | 810 | 813 | 0.00 | 0.00 | 0.00 | 1.00 | C | 46 | 1.00 |
| 163 | 0 | 722 | 0 | 346 | 1068 | 0.00 | 0.68 | 0.00 | 0.32 | T | 29 | 0.68 |
| 164 | 2 | 0 | 0 | 571 | 573 | 0.00 | 0.00 | 0.00 | 1.00 | C | 34 | 1.00 |
| 165 | 342 | 56 | 0 | 86 | 484 | 0.71 | 0.12 | 0.00 | 0.18 | A | 31 | 0.71 |
| 166 | 16 | 0 | 119 | 332 | 467 | 0.03 | 0.00 | 0.25 | 0.71 | C | 27 | 0.71 |
| 167 | 340 | 114 | 0 | 18 | 472 | 0.72 | 0.24 | 0.00 | 0.04 | A | 25 | 0.72 |
| 168 | 249 | 699 | 0 | 0 | 948 | 0.26 | 0.74 | 0.00 | 0.00 | T | 28 | 0.74 |
| 169 | 540 | 268 | 0 | 0 | 808 | 0.67 | 0.33 | 0.00 | 0.00 | A | 28 | 0.67 |
| 170 | 394 | 49 | 0 | 20 | 463 | 0.85 | 0.11 | 0.00 | 0.04 | A | 36 | 0.85 |
| 171 | 386 | 148 | 0 | 6 | 540 | 0.71 | 0.27 | 0.00 | 0.01 | A | 25 | 0.71 |
| 172 | 8 | 0 | 0 | 570 | 578 | 0.01 | 0.00 | 0.00 | 0.99 | C | 41 | 0.99 |
| 173 | 296 | 0 | 4 | 180 | 480 | 0.62 | 0.00 | 0.01 | 0.38 | A | 25 | 0.62 |
| 174 | 33 | 0 | 0 | 513 | 546 | 0.06 | 0.00 | 0.00 | 0.94 | C | 29 | 0.94 |
| 175 | 297 | 0 | 45 | 12 | 354 | 0.84 | 0.00 | 0.13 | 0.03 | A | 41 | 0.84 |
| 176 | 521 | 135 | 0 | 0 | 656 | 0.79 | 0.21 | 0.00 | 0.00 | A | 29 | 0.79 |
| 177 | 22 | 629 | 8 | 0 | 659 | 0.03 | 0.95 | 0.01 | 0.00 | T | 32 | 0.95 |
| 178 | 601 | 0 | 60 | 0 | 661 | 0.91 | 0.00 | 0.09 | 0.00 | A | 41 | 0.91 |
| 179 | 300 | 22 | 0 | 111 | 433 | 0.69 | 0.05 | 0.00 | 0.26 | A | 32 | 0.69 |
| 180 | 0 | 0 | 0 | 697 | 697 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 181 | 0 | 0 | 14 | 701 | 715 | 0.00 | 0.00 | 0.02 | 0.98 | C | 58 | 0.98 |
| 182 | 0 | 9 | 0 | 808 | 817 | 0.00 | 0.01 | 0.00 | 0.99 | C | 58 | 0.99 |
| 183 | 0 | 991 | 0 | 100 | 1091 | 0.00 | 0.91 | 0.00 | 0.09 | T | 58 | 0.91 |
| 184 | 0 | 282 | 53 | 696 | 1031 | 0.00 | 0.27 | 0.05 | 0.68 | C | 32 | 0.68 |
| 185 | 9 | 597 | 116 | 18 | 740 | 0.01 | 0.81 | 0.16 | 0.02 | T | 32 | 0.81 |
| 186 | 582 | 0 | 7 | 0 | 589 | 0.99 | 0.00 | 0.01 | 0.00 | A | 34 | 0.99 |
| 187 | 425 | 12 | 0 | 0 | 437 | 0.97 | 0.03 | 0.00 | 0.00 | A | 58 | 0.97 |
| 188 | 0 | 0 | 6 | 497 | 503 | 0.00 | 0.00 | 0.01 | 0.99 | C | 51 | 0.99 |
| 189 | 0 | 0 | 0 | 835 | 835 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 190 | 2 | 588 | 1 | 45 | 636 | 0.00 | 0.92 | 0.00 | 0.07 | T | 51 | 0.92 |
| 191 | 551 | 47 | 0 | 83 | 681 | 0.81 | 0.07 | 0.00 | 0.12 | A | 58 | 0.81 |
| 192 | 327 | 0 | 37 | 0 | 364 | 0.90 | 0.00 | 0.10 | 0.00 | A | 58 | 0.90 |
| 193 | 423 | 0 | 30 | 0 | 453 | 0.93 | 0.00 | 0.07 | 0.00 | A | 58 | 0.93 |
| 194 | 507 | 171 | 0 | 4 | 682 | 0.74 | 0.25 | 0.00 | 0.01 | A | 34 | 0.74 |
| 195 | 0 | 828 | 0 | 0 | 828 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 196 | 55 | 1040 | 14 | 0 | 1109 | 0.05 | 0.94 | 0.01 | 0.00 | T | 58 | 0.94 |
| 197 | 637 | 319 | 0 | 0 | 956 | 0.67 | 0.33 | 0.00 | 0.00 | A | 34 | 0.67 |
| 198 | 9 | 25 | 0 | 592 | 626 | 0.01 | 0.04 | 0.00 | 0.95 | C | 34 | 0.95 |
| 199 | 16 | 654 | 0 | 38 | 708 | 0.02 | 0.92 | 0.00 | 0.05 | T | 58 | 0.92 |
| 200 | 535 | 0 | 3 | 39 | 577 | 0.93 | 0.00 | 0.01 | 0.07 | A | 58 | 0.93 |
| 201 | 497 | 22 | 0 | 0 | 519 | 0.96 | 0.04 | 0.00 | 0.00 | A | 58 | 0.96 |
| 202 | 293 | 23 | 0 | 31 | 347 | 0.84 | 0.07 | 0.00 | 0.09 | A | 58 | 0.84 |
| 203 | 0 | 6 | 0 | 600 | 606 | 0.00 | 0.01 | 0.00 | 0.99 | C | 58 | 0.99 |
| 204 | 0 | 0 | 0 | 834 | 834 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 205 | 0 | 101 | 0 | 559 | 660 | 0.00 | 0.15 | 0.00 | 0.85 | C | 34 | 0.85 |
| 206 | 0 | 1023 | 0 | 55 | 1078 | 0.00 | 0.95 | 0.00 | 0.05 | T | 58 | 0.95 |
| 207 | 0 | 1397 | 0 | 17 | 1414 | 0.00 | 0.99 | 0.00 | 0.01 | T | 51 | 0.99 |
| 208 | 296 | 1007 | 0 | 0 | 1303 | 0.23 | 0.77 | 0.00 | 0.00 | T | 30 | 0.77 |
| 209 | 455 | 225 | 17 | 27 | 724 | 0.63 | 0.31 | 0.02 | 0.04 | A | 24 | 0.63 |
| 210 | 432 | 17 | 481 | 0 | 930 | 0.46 | 0.02 | 0.52 | 0.00 | G | 19 | 0.52 |
| 211 | 21 | 496 | 208 | 0 | 725 | 0.03 | 0.68 | 0.29 | 0.00 | T | 23 | 0.68 |
| 212 | 40 | 0 | 528 | 0 | 568 | 0.07 | 0.00 | 0.93 | 0.00 | G | 25 | 0.93 |
| 213 | 470 | 0 | 358 | 0 | 828 | 0.57 | 0.00 | 0.43 | 0.00 | A | 17 | 0.57 |
| 214 | 4 | 0 | 621 | 0 | 625 | 0.01 | 0.00 | 0.99 | 0.00 | G | 30 | 0.99 |
| 215 | 0 | 0 | 894 | 0 | 894 | 0.00 | 0.00 | 1.00 | 0.00 | G | 51 | 1.00 |
| 216 | 0 | 3 | 509 | 23 | 535 | 0.00 | 0.01 | 0.95 | 0.04 | G | 32 | 0.95 |
| 217 | 0 | 663 | 22 | 14 | 699 | 0.00 | 0.95 | 0.03 | 0.02 | T | 49 | 0.95 |
| 218 | 122 | 591 | 0 | 13 | 726 | 0.17 | 0.81 | 0.00 | 0.02 | T | 30 | 0.81 |
| 219 | 436 | 176 | 6 | 0 | 618 | 0.71 | 0.28 | 0.01 | 0.00 | A | 29 | 0.71 |
| 220 | 580 | 336 | 0 | 0 | 916 | 0.63 | 0.37 | 0.00 | 0.00 | A | 16 | 0.63 |
| 221 | 47 | 1272 | 0 | 0 | 1319 | 0.04 | 0.96 | 0.00 | 0.00 | T | 29 | 0.96 |
| 222 | 774 | 2650 | 0 | 0 | 3424 | 0.23 | 0.77 | 0.00 | 0.00 | T | 30 | 0.77 |
| 223 | 2348 | 170 | 0 | 0 | 2518 | 0.93 | 0.07 | 0.00 | 0.00 | A | 29 | 0.93 |
| 224 | 464 | 12 | 0 | 0 | 476 | 0.97 | 0.03 | 0.00 | 0.00 | A | 34 | 0.97 |
| 225 | 169 | 0 | 30 | 1 | 200 | 0.84 | 0.00 | 0.15 | 0.00 | A | 32 | 0.84 |
Trimming thresholds :
| Raw sequence information | Values |
|---|---|
| Raw sequence length : | 225 bp |
| Mean of raw sequence Phred quality scores : | 38.61 |
| Quality report - Trimmed sequence information | Values |
|---|---|
| Trimmed sequence length : | 199 bp |
| Trimmed sequence start position : | 8 |
| Trimmed sequence end position : | 207 |
| Mean of trimmed sequence Phred quality scores : | 40.43 |
Trimming thresholds :
| Raw sequence information | Values |
|---|---|
| Raw sequence length : | 225 bp |
| Mean of raw sequence primary peak ratios : | 0.88 |
| Percentage of non-mixed positions on raw sequence : | 79.56 % |
| Mixed peak report - Trimmed sequence information | Values |
|---|---|
| Trimmed sequence length : | 219 bp |
| Trimmed sequence start position : | 7 |
| Trimmed sequence end position : | 225 |
| Mean of trimmed sequence primary peak ratios : | 0.89 |
| Percentage of non-mixed positions on trimmed sequence : | 80.82 % |
| Final trimmed sequence information | Values |
|---|---|
| Length : | 200 bp |
| Start position : | 8 |
| End position : | 207 |
| Mean of Phred quality scores : | 40.44 |
| Mean of primary peak ratio : | 0.89 |
| Percentage of non-mixed positions : | 82 % |
Sequence of primary peaks:
## TTCCATACCCTCTAACCTATAATTACTAAACCCTTTAGTGAGGGTTAATTACCCCCCCCATACCACTAATTAACTAAAAATTCACCTACCAACCACAACCAATCAACAACACAAACCCCTCCCCAAAACAAAACTAACAACCCACCCACCCAACCTCACATAAACACAATAACCCTCTAACCTAAAATTACTAAACCCTT
Open chromatogram file in a new tab
| Position | A peak | T peak | G peak | C peak | Total | A ratio | T ratio | G ratio | C ratio | Primary base | Quality score | Primary ratio |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8 | 1 | 2101 | 0 | 0 | 2102 | 0.00 | 1.00 | 0.00 | 0.00 | T | 43 | 1.00 |
| 9 | 1 | 2861 | 0 | 0 | 2862 | 0.00 | 1.00 | 0.00 | 0.00 | T | 44 | 1.00 |
| 10 | 0 | 0 | 0 | 1518 | 1518 | 0.00 | 0.00 | 0.00 | 1.00 | C | 44 | 1.00 |
| 11 | 0 | 2 | 0 | 1639 | 1641 | 0.00 | 0.00 | 0.00 | 1.00 | C | 36 | 1.00 |
| 12 | 1316 | 0 | 0 | 0 | 1316 | 1.00 | 0.00 | 0.00 | 0.00 | A | 28 | 1.00 |
| 13 | 0 | 1178 | 0 | 226 | 1404 | 0.00 | 0.84 | 0.00 | 0.16 | T | 29 | 0.84 |
| 14 | 1381 | 0 | 15 | 0 | 1396 | 0.99 | 0.00 | 0.01 | 0.00 | A | 26 | 0.99 |
| 15 | 0 | 0 | 0 | 1258 | 1258 | 0.00 | 0.00 | 0.00 | 1.00 | C | 26 | 1.00 |
| 16 | 0 | 2 | 0 | 943 | 945 | 0.00 | 0.00 | 0.00 | 1.00 | C | 46 | 1.00 |
| 17 | 0 | 2 | 0 | 1309 | 1311 | 0.00 | 0.00 | 0.00 | 1.00 | C | 46 | 1.00 |
| 18 | 0 | 2168 | 0 | 0 | 2168 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 19 | 81 | 0 | 0 | 1484 | 1565 | 0.05 | 0.00 | 0.00 | 0.95 | C | 46 | 0.95 |
| 20 | 0 | 1280 | 9 | 0 | 1289 | 0.00 | 0.99 | 0.01 | 0.00 | T | 51 | 0.99 |
| 21 | 1553 | 0 | 0 | 0 | 1553 | 1.00 | 0.00 | 0.00 | 0.00 | A | 51 | 1.00 |
| 22 | 1075 | 2 | 336 | 0 | 1413 | 0.76 | 0.00 | 0.24 | 0.00 | A | 26 | 0.76 |
| 23 | 0 | 0 | 0 | 875 | 875 | 0.00 | 0.00 | 0.00 | 1.00 | C | 25 | 1.00 |
| 24 | 55 | 1 | 0 | 1153 | 1209 | 0.05 | 0.00 | 0.00 | 0.95 | C | 51 | 0.95 |
| 25 | 0 | 1170 | 0 | 0 | 1170 | 0.00 | 1.00 | 0.00 | 0.00 | T | 29 | 1.00 |
| 26 | 1433 | 0 | 0 | 0 | 1433 | 1.00 | 0.00 | 0.00 | 0.00 | A | 21 | 1.00 |
| 27 | 0 | 208 | 0 | 0 | 208 | 0.00 | 1.00 | 0.00 | 0.00 | T | 16 | 1.00 |
| 28 | 861 | 0 | 0 | 0 | 861 | 1.00 | 0.00 | 0.00 | 0.00 | A | 21 | 1.00 |
| 29 | 504 | 0 | 0 | 159 | 663 | 0.76 | 0.00 | 0.00 | 0.24 | A | 14 | 0.76 |
| 30 | 0 | 1698 | 0 | 0 | 1698 | 0.00 | 1.00 | 0.00 | 0.00 | T | 26 | 1.00 |
| 31 | 3 | 2690 | 0 | 0 | 2693 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 32 | 1717 | 2 | 0 | 1 | 1720 | 1.00 | 0.00 | 0.00 | 0.00 | A | 50 | 1.00 |
| 33 | 0 | 0 | 0 | 965 | 965 | 0.00 | 0.00 | 0.00 | 1.00 | C | 50 | 1.00 |
| 34 | 2 | 1309 | 0 | 319 | 1630 | 0.00 | 0.80 | 0.00 | 0.20 | T | 29 | 0.80 |
| 35 | 1192 | 631 | 0 | 0 | 1823 | 0.65 | 0.35 | 0.00 | 0.00 | A | 25 | 0.65 |
| 36 | 951 | 0 | 0 | 0 | 951 | 1.00 | 0.00 | 0.00 | 0.00 | A | 31 | 1.00 |
| 37 | 521 | 0 | 0 | 0 | 521 | 1.00 | 0.00 | 0.00 | 0.00 | A | 16 | 1.00 |
| 38 | 0 | 0 | 0 | 1146 | 1146 | 0.00 | 0.00 | 0.00 | 1.00 | C | 31 | 1.00 |
| 39 | 11 | 0 | 0 | 674 | 685 | 0.02 | 0.00 | 0.00 | 0.98 | C | 49 | 0.98 |
| 40 | 0 | 2 | 0 | 1584 | 1586 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 41 | 0 | 1607 | 0 | 520 | 2127 | 0.00 | 0.76 | 0.00 | 0.24 | T | 32 | 0.76 |
| 42 | 16 | 2225 | 0 | 0 | 2241 | 0.01 | 0.99 | 0.00 | 0.00 | T | 46 | 0.99 |
| 43 | 161 | 1587 | 0 | 0 | 1748 | 0.09 | 0.91 | 0.00 | 0.00 | T | 26 | 0.91 |
| 44 | 1318 | 0 | 0 | 0 | 1318 | 1.00 | 0.00 | 0.00 | 0.00 | A | 29 | 1.00 |
| 45 | 0 | 266 | 1173 | 0 | 1439 | 0.00 | 0.18 | 0.82 | 0.00 | G | 41 | 0.82 |
| 46 | 76 | 1058 | 0 | 0 | 1134 | 0.07 | 0.93 | 0.00 | 0.00 | T | 45 | 0.93 |
| 47 | 94 | 2 | 1035 | 0 | 1131 | 0.08 | 0.00 | 0.92 | 0.00 | G | 31 | 0.92 |
| 48 | 875 | 0 | 0 | 242 | 1117 | 0.78 | 0.00 | 0.00 | 0.22 | A | 25 | 0.78 |
| 49 | 2 | 0 | 1214 | 320 | 1536 | 0.00 | 0.00 | 0.79 | 0.21 | G | 27 | 0.79 |
| 50 | 0 | 0 | 1762 | 350 | 2112 | 0.00 | 0.00 | 0.83 | 0.17 | G | 46 | 0.83 |
| 51 | 0 | 6 | 1152 | 276 | 1434 | 0.00 | 0.00 | 0.80 | 0.19 | G | 48 | 0.80 |
| 52 | 0 | 1375 | 12 | 0 | 1387 | 0.00 | 0.99 | 0.01 | 0.00 | T | 45 | 0.99 |
| 53 | 0 | 1229 | 12 | 0 | 1241 | 0.00 | 0.99 | 0.01 | 0.00 | T | 36 | 0.99 |
| 54 | 1634 | 0 | 0 | 0 | 1634 | 1.00 | 0.00 | 0.00 | 0.00 | A | 28 | 1.00 |
| 55 | 1305 | 0 | 0 | 0 | 1305 | 1.00 | 0.00 | 0.00 | 0.00 | A | 28 | 1.00 |
| 56 | 0 | 1811 | 0 | 0 | 1811 | 0.00 | 1.00 | 0.00 | 0.00 | T | 23 | 1.00 |
| 57 | 0 | 4829 | 0 | 326 | 5155 | 0.00 | 0.94 | 0.00 | 0.06 | T | 30 | 0.94 |
| 58 | 6007 | 13 | 0 | 232 | 6252 | 0.96 | 0.00 | 0.00 | 0.04 | A | 25 | 0.96 |
| 59 | 0 | 0 | 0 | 480 | 480 | 0.00 | 0.00 | 0.00 | 1.00 | C | 14 | 1.00 |
| 60 | 488 | 0 | 0 | 578 | 1066 | 0.46 | 0.00 | 0.00 | 0.54 | C | 6 | 0.54 |
| 61 | 0 | 0 | 0 | 577 | 577 | 0.00 | 0.00 | 0.00 | 1.00 | C | 50 | 1.00 |
| 62 | 0 | 0 | 0 | 683 | 683 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 63 | 0 | 0 | 0 | 633 | 633 | 0.00 | 0.00 | 0.00 | 1.00 | C | 54 | 1.00 |
| 64 | 0 | 0 | 0 | 690 | 690 | 0.00 | 0.00 | 0.00 | 1.00 | C | 55 | 1.00 |
| 65 | 0 | 0 | 0 | 673 | 673 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 66 | 2 | 0 | 0 | 546 | 548 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 67 | 205 | 0 | 62 | 0 | 267 | 0.77 | 0.00 | 0.23 | 0.00 | A | 58 | 0.77 |
| 68 | 2 | 588 | 0 | 0 | 590 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 69 | 480 | 158 | 0 | 0 | 638 | 0.75 | 0.25 | 0.00 | 0.00 | A | 34 | 0.75 |
| 70 | 0 | 0 | 0 | 725 | 725 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 71 | 0 | 0 | 0 | 768 | 768 | 0.00 | 0.00 | 0.00 | 1.00 | C | 41 | 1.00 |
| 72 | 199 | 0 | 0 | 165 | 364 | 0.55 | 0.00 | 0.00 | 0.45 | A | 36 | 0.55 |
| 73 | 0 | 92 | 0 | 490 | 582 | 0.00 | 0.16 | 0.00 | 0.84 | C | 36 | 0.84 |
| 74 | 0 | 717 | 0 | 87 | 804 | 0.00 | 0.89 | 0.00 | 0.11 | T | 58 | 0.89 |
| 75 | 561 | 235 | 0 | 0 | 796 | 0.70 | 0.30 | 0.00 | 0.00 | A | 31 | 0.70 |
| 76 | 422 | 0 | 0 | 1 | 423 | 1.00 | 0.00 | 0.00 | 0.00 | A | 29 | 1.00 |
| 77 | 0 | 431 | 0 | 13 | 444 | 0.00 | 0.97 | 0.00 | 0.03 | T | 58 | 0.97 |
| 78 | 0 | 1107 | 0 | 0 | 1107 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 79 | 527 | 0 | 0 | 0 | 527 | 1.00 | 0.00 | 0.00 | 0.00 | A | 36 | 1.00 |
| 80 | 341 | 2 | 4 | 1 | 348 | 0.98 | 0.01 | 0.01 | 0.00 | A | 28 | 0.98 |
| 81 | 0 | 224 | 0 | 356 | 580 | 0.00 | 0.39 | 0.00 | 0.61 | C | 16 | 0.61 |
| 82 | 2 | 719 | 0 | 0 | 721 | 0.00 | 1.00 | 0.00 | 0.00 | T | 29 | 1.00 |
| 83 | 502 | 0 | 0 | 0 | 502 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 84 | 469 | 3 | 0 | 0 | 472 | 0.99 | 0.01 | 0.00 | 0.00 | A | 58 | 0.99 |
| 85 | 449 | 0 | 6 | 0 | 455 | 0.99 | 0.00 | 0.01 | 0.00 | A | 58 | 0.99 |
| 86 | 394 | 0 | 51 | 0 | 445 | 0.89 | 0.00 | 0.11 | 0.00 | A | 58 | 0.89 |
| 87 | 549 | 0 | 0 | 0 | 549 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 88 | 9 | 699 | 0 | 0 | 708 | 0.01 | 0.99 | 0.00 | 0.00 | T | 51 | 0.99 |
| 89 | 0 | 731 | 0 | 2 | 733 | 0.00 | 1.00 | 0.00 | 0.00 | T | 51 | 1.00 |
| 90 | 0 | 189 | 0 | 550 | 739 | 0.00 | 0.26 | 0.00 | 0.74 | C | 28 | 0.74 |
| 91 | 189 | 0 | 16 | 186 | 391 | 0.48 | 0.00 | 0.04 | 0.48 | A | 25 | 0.48 |
| 92 | 3 | 0 | 0 | 558 | 561 | 0.01 | 0.00 | 0.00 | 0.99 | C | 28 | 0.99 |
| 93 | 0 | 197 | 0 | 639 | 836 | 0.00 | 0.24 | 0.00 | 0.76 | C | 34 | 0.76 |
| 94 | 0 | 410 | 3 | 0 | 413 | 0.00 | 0.99 | 0.01 | 0.00 | T | 58 | 0.99 |
| 95 | 587 | 0 | 0 | 0 | 587 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 96 | 31 | 0 | 0 | 535 | 566 | 0.05 | 0.00 | 0.00 | 0.95 | C | 41 | 0.95 |
| 97 | 13 | 0 | 0 | 544 | 557 | 0.02 | 0.00 | 0.00 | 0.98 | C | 46 | 0.98 |
| 98 | 321 | 0 | 0 | 0 | 321 | 1.00 | 0.00 | 0.00 | 0.00 | A | 46 | 1.00 |
| 99 | 240 | 2 | 28 | 0 | 270 | 0.89 | 0.01 | 0.10 | 0.00 | A | 51 | 0.89 |
| 100 | 0 | 0 | 0 | 526 | 526 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 101 | 0 | 3 | 15 | 332 | 350 | 0.00 | 0.01 | 0.04 | 0.95 | C | 51 | 0.95 |
| 102 | 314 | 0 | 0 | 0 | 314 | 1.00 | 0.00 | 0.00 | 0.00 | A | 50 | 1.00 |
| 103 | 0 | 0 | 42 | 383 | 425 | 0.00 | 0.00 | 0.10 | 0.90 | C | 41 | 0.90 |
| 104 | 309 | 0 | 0 | 163 | 472 | 0.65 | 0.00 | 0.00 | 0.35 | A | 16 | 0.65 |
| 105 | 340 | 10 | 0 | 6 | 356 | 0.96 | 0.03 | 0.00 | 0.02 | A | 29 | 0.96 |
| 106 | 0 | 2 | 31 | 400 | 433 | 0.00 | 0.00 | 0.07 | 0.92 | C | 48 | 0.92 |
| 107 | 28 | 0 | 0 | 685 | 713 | 0.04 | 0.00 | 0.00 | 0.96 | C | 47 | 0.96 |
| 108 | 376 | 0 | 0 | 0 | 376 | 1.00 | 0.00 | 0.00 | 0.00 | A | 21 | 1.00 |
| 109 | 258 | 178 | 8 | 0 | 444 | 0.58 | 0.40 | 0.02 | 0.00 | A | 17 | 0.58 |
| 110 | 177 | 591 | 0 | 2 | 770 | 0.23 | 0.77 | 0.00 | 0.00 | T | 26 | 0.77 |
| 111 | 2 | 76 | 0 | 605 | 683 | 0.00 | 0.11 | 0.00 | 0.89 | C | 36 | 0.89 |
| 112 | 219 | 0 | 0 | 1 | 220 | 1.00 | 0.00 | 0.00 | 0.00 | A | 26 | 1.00 |
| 113 | 282 | 111 | 0 | 2 | 395 | 0.71 | 0.28 | 0.00 | 0.01 | A | 16 | 0.71 |
| 114 | 52 | 0 | 0 | 480 | 532 | 0.10 | 0.00 | 0.00 | 0.90 | C | 26 | 0.90 |
| 115 | 219 | 28 | 5 | 0 | 252 | 0.87 | 0.11 | 0.02 | 0.00 | A | 39 | 0.87 |
| 116 | 437 | 0 | 114 | 0 | 551 | 0.79 | 0.00 | 0.21 | 0.00 | A | 28 | 0.79 |
| 117 | 121 | 0 | 46 | 416 | 583 | 0.21 | 0.00 | 0.08 | 0.71 | C | 20 | 0.71 |
| 118 | 277 | 0 | 0 | 218 | 495 | 0.56 | 0.00 | 0.00 | 0.44 | A | 11 | 0.56 |
| 119 | 15 | 105 | 22 | 366 | 508 | 0.03 | 0.21 | 0.04 | 0.72 | C | 20 | 0.72 |
| 120 | 295 | 0 | 0 | 224 | 519 | 0.57 | 0.00 | 0.00 | 0.43 | A | 16 | 0.57 |
| 121 | 254 | 17 | 89 | 0 | 360 | 0.71 | 0.05 | 0.25 | 0.00 | A | 16 | 0.71 |
| 122 | 456 | 17 | 4 | 94 | 571 | 0.80 | 0.03 | 0.01 | 0.16 | A | 31 | 0.80 |
| 123 | 6 | 40 | 0 | 404 | 450 | 0.01 | 0.09 | 0.00 | 0.90 | C | 50 | 0.90 |
| 124 | 0 | 0 | 0 | 815 | 815 | 0.00 | 0.00 | 0.00 | 1.00 | C | 50 | 1.00 |
| 125 | 0 | 0 | 0 | 832 | 832 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 126 | 0 | 13 | 10 | 631 | 654 | 0.00 | 0.02 | 0.02 | 0.96 | C | 29 | 0.96 |
| 127 | 0 | 946 | 0 | 350 | 1296 | 0.00 | 0.73 | 0.00 | 0.27 | T | 29 | 0.73 |
| 128 | 0 | 294 | 0 | 839 | 1133 | 0.00 | 0.26 | 0.00 | 0.74 | C | 32 | 0.74 |
| 129 | 0 | 1 | 31 | 600 | 632 | 0.00 | 0.00 | 0.05 | 0.95 | C | 51 | 0.95 |
| 130 | 0 | 14 | 0 | 445 | 459 | 0.00 | 0.03 | 0.00 | 0.97 | C | 51 | 0.97 |
| 131 | 1 | 0 | 2 | 599 | 602 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 132 | 239 | 12 | 0 | 106 | 357 | 0.67 | 0.03 | 0.00 | 0.30 | A | 32 | 0.67 |
| 133 | 324 | 0 | 49 | 0 | 373 | 0.87 | 0.00 | 0.13 | 0.00 | A | 58 | 0.87 |
| 134 | 555 | 0 | 1 | 0 | 556 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 135 | 549 | 0 | 0 | 0 | 549 | 1.00 | 0.00 | 0.00 | 0.00 | A | 58 | 1.00 |
| 136 | 168 | 0 | 18 | 355 | 541 | 0.31 | 0.00 | 0.03 | 0.66 | C | 34 | 0.66 |
| 137 | 372 | 30 | 0 | 0 | 402 | 0.93 | 0.07 | 0.00 | 0.00 | A | 58 | 0.93 |
| 138 | 392 | 12 | 61 | 0 | 465 | 0.84 | 0.03 | 0.13 | 0.00 | A | 58 | 0.84 |
| 139 | 644 | 0 | 49 | 0 | 693 | 0.93 | 0.00 | 0.07 | 0.00 | A | 46 | 0.93 |
| 140 | 392 | 29 | 17 | 0 | 438 | 0.89 | 0.07 | 0.04 | 0.00 | A | 46 | 0.89 |
| 141 | 41 | 149 | 0 | 394 | 584 | 0.07 | 0.26 | 0.00 | 0.67 | C | 31 | 0.67 |
| 142 | 0 | 831 | 0 | 2 | 833 | 0.00 | 1.00 | 0.00 | 0.00 | T | 34 | 1.00 |
| 143 | 689 | 236 | 75 | 0 | 1000 | 0.69 | 0.24 | 0.07 | 0.00 | A | 34 | 0.69 |
| 144 | 597 | 0 | 100 | 3 | 700 | 0.85 | 0.00 | 0.14 | 0.00 | A | 34 | 0.85 |
| 145 | 171 | 11 | 0 | 419 | 601 | 0.28 | 0.02 | 0.00 | 0.70 | C | 34 | 0.70 |
| 146 | 426 | 0 | 15 | 3 | 444 | 0.96 | 0.00 | 0.03 | 0.01 | A | 58 | 0.96 |
| 147 | 386 | 0 | 15 | 0 | 401 | 0.96 | 0.00 | 0.04 | 0.00 | A | 58 | 0.96 |
| 148 | 2 | 0 | 0 | 645 | 647 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 149 | 0 | 0 | 0 | 876 | 876 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 150 | 0 | 0 | 0 | 637 | 637 | 0.00 | 0.00 | 0.00 | 1.00 | C | 41 | 1.00 |
| 151 | 281 | 22 | 0 | 263 | 566 | 0.50 | 0.04 | 0.00 | 0.46 | A | 25 | 0.50 |
| 152 | 0 | 0 | 0 | 615 | 615 | 0.00 | 0.00 | 0.00 | 1.00 | C | 41 | 1.00 |
| 153 | 0 | 17 | 0 | 626 | 643 | 0.00 | 0.03 | 0.00 | 0.97 | C | 58 | 0.97 |
| 154 | 0 | 0 | 0 | 846 | 846 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 155 | 235 | 0 | 31 | 175 | 441 | 0.53 | 0.00 | 0.07 | 0.40 | A | 25 | 0.53 |
| 156 | 0 | 0 | 29 | 602 | 631 | 0.00 | 0.00 | 0.05 | 0.95 | C | 51 | 0.95 |
| 157 | 0 | 0 | 0 | 788 | 788 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 158 | 0 | 0 | 12 | 502 | 514 | 0.00 | 0.00 | 0.02 | 0.98 | C | 51 | 0.98 |
| 159 | 282 | 0 | 4 | 51 | 337 | 0.84 | 0.00 | 0.01 | 0.15 | A | 58 | 0.84 |
| 160 | 319 | 0 | 25 | 42 | 386 | 0.83 | 0.00 | 0.06 | 0.11 | A | 52 | 0.83 |
| 161 | 36 | 0 | 0 | 643 | 679 | 0.05 | 0.00 | 0.00 | 0.95 | C | 52 | 0.95 |
| 162 | 0 | 3 | 0 | 810 | 813 | 0.00 | 0.00 | 0.00 | 1.00 | C | 46 | 1.00 |
| 163 | 0 | 722 | 0 | 346 | 1068 | 0.00 | 0.68 | 0.00 | 0.32 | T | 29 | 0.68 |
| 164 | 2 | 0 | 0 | 571 | 573 | 0.00 | 0.00 | 0.00 | 1.00 | C | 34 | 1.00 |
| 165 | 342 | 56 | 0 | 86 | 484 | 0.71 | 0.12 | 0.00 | 0.18 | A | 31 | 0.71 |
| 166 | 16 | 0 | 119 | 332 | 467 | 0.03 | 0.00 | 0.25 | 0.71 | C | 27 | 0.71 |
| 167 | 340 | 114 | 0 | 18 | 472 | 0.72 | 0.24 | 0.00 | 0.04 | A | 25 | 0.72 |
| 168 | 249 | 699 | 0 | 0 | 948 | 0.26 | 0.74 | 0.00 | 0.00 | T | 28 | 0.74 |
| 169 | 540 | 268 | 0 | 0 | 808 | 0.67 | 0.33 | 0.00 | 0.00 | A | 28 | 0.67 |
| 170 | 394 | 49 | 0 | 20 | 463 | 0.85 | 0.11 | 0.00 | 0.04 | A | 36 | 0.85 |
| 171 | 386 | 148 | 0 | 6 | 540 | 0.71 | 0.27 | 0.00 | 0.01 | A | 25 | 0.71 |
| 172 | 8 | 0 | 0 | 570 | 578 | 0.01 | 0.00 | 0.00 | 0.99 | C | 41 | 0.99 |
| 173 | 296 | 0 | 4 | 180 | 480 | 0.62 | 0.00 | 0.01 | 0.38 | A | 25 | 0.62 |
| 174 | 33 | 0 | 0 | 513 | 546 | 0.06 | 0.00 | 0.00 | 0.94 | C | 29 | 0.94 |
| 175 | 297 | 0 | 45 | 12 | 354 | 0.84 | 0.00 | 0.13 | 0.03 | A | 41 | 0.84 |
| 176 | 521 | 135 | 0 | 0 | 656 | 0.79 | 0.21 | 0.00 | 0.00 | A | 29 | 0.79 |
| 177 | 22 | 629 | 8 | 0 | 659 | 0.03 | 0.95 | 0.01 | 0.00 | T | 32 | 0.95 |
| 178 | 601 | 0 | 60 | 0 | 661 | 0.91 | 0.00 | 0.09 | 0.00 | A | 41 | 0.91 |
| 179 | 300 | 22 | 0 | 111 | 433 | 0.69 | 0.05 | 0.00 | 0.26 | A | 32 | 0.69 |
| 180 | 0 | 0 | 0 | 697 | 697 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 181 | 0 | 0 | 14 | 701 | 715 | 0.00 | 0.00 | 0.02 | 0.98 | C | 58 | 0.98 |
| 182 | 0 | 9 | 0 | 808 | 817 | 0.00 | 0.01 | 0.00 | 0.99 | C | 58 | 0.99 |
| 183 | 0 | 991 | 0 | 100 | 1091 | 0.00 | 0.91 | 0.00 | 0.09 | T | 58 | 0.91 |
| 184 | 0 | 282 | 53 | 696 | 1031 | 0.00 | 0.27 | 0.05 | 0.68 | C | 32 | 0.68 |
| 185 | 9 | 597 | 116 | 18 | 740 | 0.01 | 0.81 | 0.16 | 0.02 | T | 32 | 0.81 |
| 186 | 582 | 0 | 7 | 0 | 589 | 0.99 | 0.00 | 0.01 | 0.00 | A | 34 | 0.99 |
| 187 | 425 | 12 | 0 | 0 | 437 | 0.97 | 0.03 | 0.00 | 0.00 | A | 58 | 0.97 |
| 188 | 0 | 0 | 6 | 497 | 503 | 0.00 | 0.00 | 0.01 | 0.99 | C | 51 | 0.99 |
| 189 | 0 | 0 | 0 | 835 | 835 | 0.00 | 0.00 | 0.00 | 1.00 | C | 51 | 1.00 |
| 190 | 2 | 588 | 1 | 45 | 636 | 0.00 | 0.92 | 0.00 | 0.07 | T | 51 | 0.92 |
| 191 | 551 | 47 | 0 | 83 | 681 | 0.81 | 0.07 | 0.00 | 0.12 | A | 58 | 0.81 |
| 192 | 327 | 0 | 37 | 0 | 364 | 0.90 | 0.00 | 0.10 | 0.00 | A | 58 | 0.90 |
| 193 | 423 | 0 | 30 | 0 | 453 | 0.93 | 0.00 | 0.07 | 0.00 | A | 58 | 0.93 |
| 194 | 507 | 171 | 0 | 4 | 682 | 0.74 | 0.25 | 0.00 | 0.01 | A | 34 | 0.74 |
| 195 | 0 | 828 | 0 | 0 | 828 | 0.00 | 1.00 | 0.00 | 0.00 | T | 58 | 1.00 |
| 196 | 55 | 1040 | 14 | 0 | 1109 | 0.05 | 0.94 | 0.01 | 0.00 | T | 58 | 0.94 |
| 197 | 637 | 319 | 0 | 0 | 956 | 0.67 | 0.33 | 0.00 | 0.00 | A | 34 | 0.67 |
| 198 | 9 | 25 | 0 | 592 | 626 | 0.01 | 0.04 | 0.00 | 0.95 | C | 34 | 0.95 |
| 199 | 16 | 654 | 0 | 38 | 708 | 0.02 | 0.92 | 0.00 | 0.05 | T | 58 | 0.92 |
| 200 | 535 | 0 | 3 | 39 | 577 | 0.93 | 0.00 | 0.01 | 0.07 | A | 58 | 0.93 |
| 201 | 497 | 22 | 0 | 0 | 519 | 0.96 | 0.04 | 0.00 | 0.00 | A | 58 | 0.96 |
| 202 | 293 | 23 | 0 | 31 | 347 | 0.84 | 0.07 | 0.00 | 0.09 | A | 58 | 0.84 |
| 203 | 0 | 6 | 0 | 600 | 606 | 0.00 | 0.01 | 0.00 | 0.99 | C | 58 | 0.99 |
| 204 | 0 | 0 | 0 | 834 | 834 | 0.00 | 0.00 | 0.00 | 1.00 | C | 58 | 1.00 |
| 205 | 0 | 101 | 0 | 559 | 660 | 0.00 | 0.15 | 0.00 | 0.85 | C | 34 | 0.85 |
| 206 | 0 | 1023 | 0 | 55 | 1078 | 0.00 | 0.95 | 0.00 | 0.05 | T | 58 | 0.95 |
| 207 | 0 | 1397 | 0 | 17 | 1414 | 0.00 | 0.99 | 0.00 | 0.01 | T | 51 | 0.99 |
Sequencing result #1 is aligned on both sense and antisense bisulfite converted DNA sequences to determine the sequencing direction as forward or reverse.
Warning: Trimmed sequence from the sequencing result #1 was found with insufficient length or insufficient quality and will not be used.
Trimmed sequence of primary peaks from sequencing result #1 is aligned with bisulfite converted reference DNA sense sequence
Trimmed sequence of primary peaks from sequencing result #1 is aligned with bisulfite converted reference DNA antisense sequence
Warning: Insufficient quality of trimmed sequence for direction determination.
Sequencing result #2 is aligned on both sense and antisense bisulfite converted DNA sequences to determine the sequencing direction as forward or reverse.
Trimmed sequence of primary peaks from sequencing result #2 is aligned with bisulfite converted reference DNA sense sequence
## ########################################
## # Program: Biostrings (version 2.64.0), a Bioconductor package
## # Rundate: Wed May 18 12:53:16 2022
## ########################################
## #=======================================
## #
## # Aligned_sequences: 2
## # 1: P1
## # 2: S1
## # Matrix: NA
## # Gap_penalty: 14.0
## # Extend_penalty: 4.0
## #
## # Length: 8
## # Identity: 8/8 (100.0%)
## # Similarity: NA/8 (NA%)
## # Gaps: 0/8 (0.0%)
## # Score: 15.85405
## #
## #
## #=======================================
##
## P1 40 GAGGGTTA 47
## ||||||||
## S1 87 GAGGGTTA 94
##
##
## #---------------------------------------
## #---------------------------------------
Trimmed sequence of primary peaks from sequencing result #2 is aligned with bisulfite converted reference DNA antisense sequence
## ########################################
## # Program: Biostrings (version 2.64.0), a Bioconductor package
## # Rundate: Wed May 18 12:53:16 2022
## ########################################
## #=======================================
## #
## # Aligned_sequences: 2
## # 1: P1
## # 2: S1
## # Matrix: NA
## # Gap_penalty: 14.0
## # Extend_penalty: 4.0
## #
## # Length: 142
## # Identity: 130/142 (91.5%)
## # Similarity: NA/142 (NA%)
## # Gaps: 0/142 (0.0%)
## # Score: 186.8367
## #
## #
## #=======================================
##
## P1 54 CCCCCCATACCACTAATTAA 73
## |||||| |||| ||||||||
## S1 132 CCCCCCGTACCGCTAATTAA 151
##
## P1 74 CTAAAAATTCACCTACCAAC 93
## ||||||||||||||||| ||
## S1 152 CTAAAAATTCACCTACCGAC 171
##
## P1 94 CACAACCAATCAACAACACA 113
## ||||||||||||||||| |
## S1 172 CACAACCAATCAACAACGCG 191
##
## P1 114 AACCCCTCCCCAAAACAAAA 133
## |||||||||||||||| |||
## S1 192 AACCCCTCCCCAAAACGAAA 211
##
## P1 134 CTAACAACCCACCCACCCAA 153
## ||||| |||| ||||||| |
## S1 212 CTAACGACCCGCCCACCCGA 231
##
## P1 154 CCTCACATAAACACAATAAC 173
## |||| ||||||| | |||||
## S1 232 CCTCGCATAAACGCGATAAC 251
##
## P1 174 CCTCTAACCTAAAATTACTA 193
## ||||||||||||||||||||
## S1 252 CCTCTAACCTAAAATTACTA 271
##
## P1 194 AA 195
## ||
## S1 272 AA 273
##
##
## #---------------------------------------
## #---------------------------------------
Sequencing result #2 corresponds to reverse direction
To find nucleotides of reference DNA sequence positions on sequencing result, the trimmed sequence of primary peaks from forward sequencing results is aligned with bisulfite converted reference DNA sense sequence.
Warning: Insufficient length or quality of trimmed forward sequencing.
Warning: Insufficient length or quality of trimmed forward sequencing.
To find nucleotides of reference DNA sequence positions on sequencing result, the trimmed sequence of primary peaks from reverse sequencing results is aligned with bisulfite converted reference DNA antisense sequence.
## ########################################
## # Program: Biostrings (version 2.64.0), a Bioconductor package
## # Rundate: Wed May 18 12:53:17 2022
## ########################################
## #=======================================
## #
## # Aligned_sequences: 2
## # 1: P1
## # 2: S1
## # Matrix: NA
## # Gap_penalty: 14.0
## # Extend_penalty: 4.0
## #
## # Length: 142
## # Identity: 130/142 (91.5%)
## # Similarity: NA/142 (NA%)
## # Gaps: 0/142 (0.0%)
## # Score: 186.8367
## #
## #
## #=======================================
##
## P1 54 CCCCCCATACCACTAATTAA 73
## |||||| |||| ||||||||
## S1 132 CCCCCCGTACCGCTAATTAA 151
##
## P1 74 CTAAAAATTCACCTACCAAC 93
## ||||||||||||||||| ||
## S1 152 CTAAAAATTCACCTACCGAC 171
##
## P1 94 CACAACCAATCAACAACACA 113
## ||||||||||||||||| |
## S1 172 CACAACCAATCAACAACGCG 191
##
## P1 114 AACCCCTCCCCAAAACAAAA 133
## |||||||||||||||| |||
## S1 192 AACCCCTCCCCAAAACGAAA 211
##
## P1 134 CTAACAACCCACCCACCCAA 153
## ||||| |||| ||||||| |
## S1 212 CTAACGACCCGCCCACCCGA 231
##
## P1 154 CCTCACATAAACACAATAAC 173
## |||| ||||||| | |||||
## S1 232 CCTCGCATAAACGCGATAAC 251
##
## P1 174 CCTCTAACCTAAAATTACTA 193
## ||||||||||||||||||||
## S1 252 CCTCTAACCTAAAATTACTA 271
##
## P1 194 AA 195
## ||
## S1 272 AA 273
##
##
## #---------------------------------------
## #---------------------------------------
Aligned sequence from reverse sequencing result (Pattern P1):
Length: 142 bp
## CCCCCCATACCACTAATTAACTAAAAATTCACCTACCAACCACAACCAATCAACAACACAAACCCCTCCCCAAAACAAAACTAACAACCCACCCACCCAACCTCACATAAACACAATAACCCTCTAACCTAAAATTACTAAA
Aligned sequence from bisulfite converted reference DNA antisense sequence (Subject S1):
Length: 142 bp
## CCCCCCGTACCGCTAATTAACTAAAAATTCACCTACCGACCACAACCAATCAACAACGCGAACCCCTCCCCAAAACGAAACTAACGACCCGCCCACCCGACCTCGCATAAACGCGATAACCCTCTAACCTAAAATTACTAAA
| Thresholds | Values |
|---|---|
| Minimum length of the aligned sequence : | 30 bp |
| Minimum identity percentage of alignment : | 75 % |
| Minimum of bisulfite conversion rate mean : | 0.9 |
| Direction | Sequencing | Length | Identity | Mismatch | Indel in DNA reference | Indel in sequencing | Mean of conversion rates | SD of conversion rates | Quality Result |
|---|---|---|---|---|---|---|---|---|---|
| Reverse | #2 | 142 | 91.55 | 12 | 0 | 0 | 0.95 | 0.07 | Correct |
Forward sequencing result could have not been trimmed due to poor quality.
| Positions in trimmed sequencing result | Nucleotides in trimmed sequencing result | Positions in reference DNA sequence | Nucleotides in reference DNA sequence |
|---|---|---|---|
| 60 | A | 138 | G |
| 65 | A | 143 | G |
| 91 | A | 169 | G |
| 111 | A | 189 | G |
| 113 | A | 191 | G |
| 130 | A | 208 | G |
| 139 | A | 217 | G |
| 144 | A | 222 | G |
| 152 | A | 230 | G |
| 158 | A | 236 | G |
| 166 | A | 244 | G |
| 168 | A | 246 | G |
No insertions/deletions in reverse alignment.
| C number | Bisulfite conversion rate Reverse |
|---|---|
| 50 | 1.00 |
| 49 | 1.00 |
| 48 | 0.99 |
| 47 | 1.00 |
| 46 | 0.99 |
| 45 | 0.89 |
| 44 | 1.00 |
| 43 | 1.00 |
| 42 | 0.90 |
| 41 | 1.00 |
| 40 | 1.00 |
| 39 | 0.79 |
| 38 | 0.74 |
| 37 | 0.87 |
| 36 | 1.00 |
| 35 | 1.00 |
| 34 | 0.87 |
| 33 | 0.96 |
| 32 | 0.90 |
| 31 | 0.96 |
| 30 | 0.93 |
| 29 | 1.00 |
| 28 | 1.00 |
| 27 | 0.91 |
| 26 | 1.00 |
| 25 | 1.00 |
| 24 | 0.90 |
| 23 | 1.00 |
| 22 | 1.00 |
| 21 | 1.00 |
| 20 | 1.00 |
| 19 | NaN |
| C number | Position in reference DNA | Position in sequencing result (trimmed) | Position in sequencing result (raw) | A peak | T peak | G peak | C peak | Bisulfite conversion rate |
|---|---|---|---|---|---|---|---|---|
| 50 | 146 | 68 | 75 | 561 | 235 | 0 | 0 | 1.00 |
| 49 | 150 | 72 | 79 | 527 | 0 | 0 | 0 | 1.00 |
| 48 | 151 | 73 | 80 | 341 | 2 | 4 | 1 | 0.99 |
| 47 | 154 | 76 | 83 | 502 | 0 | 0 | 0 | 1.00 |
| 46 | 156 | 78 | 85 | 449 | 0 | 6 | 0 | 0.99 |
| 45 | 157 | 79 | 86 | 394 | 0 | 51 | 0 | 0.89 |
| 44 | 158 | 80 | 87 | 549 | 0 | 0 | 0 | 1.00 |
| 43 | 166 | 88 | 95 | 587 | 0 | 0 | 0 | 1.00 |
| 42 | 170 | 92 | 99 | 240 | 2 | 28 | 0 | 0.90 |
| 41 | 176 | 98 | 105 | 340 | 10 | 0 | 6 | 1.00 |
| 40 | 184 | 106 | 113 | 282 | 111 | 0 | 2 | 1.00 |
| 39 | 187 | 109 | 116 | 437 | 0 | 114 | 0 | 0.79 |
| 38 | 192 | 114 | 121 | 254 | 17 | 89 | 0 | 0.74 |
| 37 | 204 | 126 | 133 | 324 | 0 | 49 | 0 | 0.87 |
| 36 | 205 | 127 | 134 | 555 | 0 | 1 | 0 | 1.00 |
| 35 | 206 | 128 | 135 | 549 | 0 | 0 | 0 | 1.00 |
| 34 | 209 | 131 | 138 | 392 | 12 | 61 | 0 | 0.87 |
| 33 | 211 | 133 | 140 | 392 | 29 | 17 | 0 | 0.96 |
| 32 | 214 | 136 | 143 | 689 | 236 | 75 | 0 | 0.90 |
| 31 | 218 | 140 | 147 | 386 | 0 | 15 | 0 | 0.96 |
| 30 | 231 | 153 | 160 | 319 | 0 | 25 | 42 | 0.93 |
| 29 | 241 | 163 | 170 | 394 | 49 | 0 | 20 | 1.00 |
| 28 | 247 | 169 | 176 | 521 | 135 | 0 | 0 | 1.00 |
| 27 | 249 | 171 | 178 | 601 | 0 | 60 | 0 | 0.91 |
| 26 | 258 | 180 | 187 | 425 | 12 | 0 | 0 | 1.00 |
| 25 | 262 | 184 | 191 | 551 | 47 | 0 | 83 | 1.00 |
| 24 | 263 | 185 | 192 | 327 | 0 | 37 | 0 | 0.90 |
| 23 | 265 | 187 | 194 | 507 | 171 | 0 | 4 | 1.00 |
| 22 | 268 | 190 | 197 | 637 | 319 | 0 | 0 | 1.00 |
| 21 | 272 | 194 | 201 | 497 | 22 | 0 | 0 | 1.00 |
| 20 | 273 | 195 | 202 | 293 | 23 | 0 | 31 | 1.00 |
| 19 | 274 | 196 | 203 | 0 | 6 | 0 | 600 | NaN |
The maximum aligned sequence corresponds to the maximum sequence covered by at least one correct sequencing.
Length of max aligned sequence : 143 bp
Coordinates of max aligned sequence :
chr16:68771007-68771149
Maximum aligned sequence (on bisulfite converted sense sequence from the plus strand sequence) :
## TTTTAGTAATTTTAGGTTAGAGGGTTATCGCGTTTATGCGAGGTCGGGTGGGCGGGTCGTTAGTTTCGTTTTGGGGAGGGGTTCGCGTTGTTGATTGGTTGTGGTCGGTAGGTGAATTTTTAGTTAATTAGCGGTACGGGGGG
| CG number | Chromosome | Start | End | Methylation Percentage Forward | Methylation Percentage Reverse | Methylation Percentage Average | Methylation Percentage SD |
|---|---|---|---|---|---|---|---|
| 16 | chr16 | 68771143 | 68771144 | NA | 23.22 | 23.22 | NA |
| 15 | chr16 | 68771138 | 68771139 | NA | 0.00 | 0.00 | NA |
| 14 | chr16 | 68771112 | 68771113 | NA | 0.00 | 0.00 | NA |
| 13 | chr16 | 68771092 | 68771093 | NA | 0.00 | 0.00 | NA |
| 12 | chr16 | 68771090 | 68771091 | NA | 0.00 | 0.00 | NA |
| 11 | chr16 | 68771073 | 68771074 | NA | 0.00 | 0.00 | NA |
| 10 | chr16 | 68771064 | 68771065 | NA | 3.40 | 3.40 | NA |
| 9 | chr16 | 68771059 | 68771060 | NA | 0.00 | 0.00 | NA |
| 8 | chr16 | 68771051 | 68771052 | NA | 1.40 | 1.40 | NA |
| 7 | chr16 | 68771045 | 68771046 | NA | 0.00 | 0.00 | NA |
| 6 | chr16 | 68771037 | 68771038 | NA | 1.33 | 1.33 | NA |
| 5 | chr16 | 68771035 | 68771036 | NA | 13.16 | 13.16 | NA |
Warning: No sequencing data from foward direction sequencing.
| CG number | Chromosome | Start | End | G position in reference DNA | G position in sequencing result (trimmed) | G position in sequencing result (raw) | A peak | T peak | G peak | C peak | Methylation Percentage |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 16 | chr16 | 68771143 | 68771144 | 138 | 60 | 67 | 205 | 0 | 62 | 0 | 23.22 |
| 15 | chr16 | 68771138 | 68771139 | 143 | 65 | 72 | 199 | 0 | 0 | 165 | 0.00 |
| 14 | chr16 | 68771112 | 68771113 | 169 | 91 | 98 | 321 | 0 | 0 | 0 | 0.00 |
| 13 | chr16 | 68771092 | 68771093 | 189 | 111 | 118 | 277 | 0 | 0 | 218 | 0.00 |
| 12 | chr16 | 68771090 | 68771091 | 191 | 113 | 120 | 295 | 0 | 0 | 224 | 0.00 |
| 11 | chr16 | 68771073 | 68771074 | 208 | 130 | 137 | 372 | 30 | 0 | 0 | 0.00 |
| 10 | chr16 | 68771064 | 68771065 | 217 | 139 | 146 | 426 | 0 | 15 | 3 | 3.40 |
| 9 | chr16 | 68771059 | 68771060 | 222 | 144 | 151 | 281 | 22 | 0 | 263 | 0.00 |
| 8 | chr16 | 68771051 | 68771052 | 230 | 152 | 159 | 282 | 0 | 4 | 51 | 1.40 |
| 7 | chr16 | 68771045 | 68771046 | 236 | 158 | 165 | 342 | 56 | 0 | 86 | 0.00 |
| 6 | chr16 | 68771037 | 68771038 | 244 | 166 | 173 | 296 | 0 | 4 | 180 | 1.33 |
| 5 | chr16 | 68771035 | 68771036 | 246 | 168 | 175 | 297 | 0 | 45 | 12 | 13.16 |
CDH1_Low methylated DNA_2_aligned_DNAref_R.fasta
CDH1_Low methylated DNA_2_aligned_max_seq.fasta
CDH1_Low methylated DNA_2_chromatogram_1.pdf
CDH1_Low methylated DNA_2_bisconv_table.csv
CDH1_Low methylated DNA_2_bisconv_table.png
CDH1_Low methylated DNA_2_bisconv_table.xlsx
CDH1_Low methylated DNA_2_meth_table.csv
CDH1_Low methylated DNA_2_meth_table.png
CDH1_Low methylated DNA_2_meth_table.xlsx
CDH1_Low methylated DNA_2_QC.png
CDH1_Low methylated DNA_2_QC_table.csv
CDH1_Low methylated DNA_2_QC_table.xlsx
CDH1_Low methylated DNA_2_seqtable_1.csv
CDH1_Low methylated DNA_2_seqtable_1.xlsx
CDH1_Low methylated DNA_2_seqtable_2.csv
CDH1_Low methylated DNA_2_seqtable_2.xlsx
CDH1_Low methylated DNA_2_seqtable_trimmed_2.csv
CDH1_Low methylated DNA_2_seqtable_trimmed_2.xlsx
CDH1_Low methylated DNA_2_trimmedseq.png
| CG_nb | chromosome | start | end | meth_F | meth_R | meth_avg | meth_sd | collection | group | rep | clone | alg_coord_start | alg_coord_end |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16 | chr16 | 68771143 | 68771144 | NA | 23.22 | 23.22 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 15 | chr16 | 68771138 | 68771139 | NA | 0.00 | 0.00 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 14 | chr16 | 68771112 | 68771113 | NA | 0.00 | 0.00 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 13 | chr16 | 68771092 | 68771093 | NA | 0.00 | 0.00 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 12 | chr16 | 68771090 | 68771091 | NA | 0.00 | 0.00 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 11 | chr16 | 68771073 | 68771074 | NA | 0.00 | 0.00 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 10 | chr16 | 68771064 | 68771065 | NA | 3.40 | 3.40 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 9 | chr16 | 68771059 | 68771060 | NA | 0.00 | 0.00 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 8 | chr16 | 68771051 | 68771052 | NA | 1.40 | 1.40 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 7 | chr16 | 68771045 | 68771046 | NA | 0.00 | 0.00 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 6 | chr16 | 68771037 | 68771038 | NA | 1.33 | 1.33 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 | |
| 5 | chr16 | 68771035 | 68771036 | NA | 13.16 | 13.16 | NA | Low methylated DNA | 2 | NA | 68771007 | 68771149 |